Gene Rmar_1974 details

Gene Information

• Locus tag: Rmar_1974
• ID: 8568631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 2302288
• End bp: 2304309
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 64%
• Product: acyl-CoA dehydrogenase domain protein
• Protein accession: YP_003291245
• Protein GI: 268317526

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGTTAC TGAGTCGTCT GAAGGGCATC TCGGCGCAGG ACCGCCGGAT GATTGAGGAT 
ATCGAGGCCA TGCTGGGCCC GGAGCCCGAA GAAATGGGCT TCATGAAAAA CCTTTTCTGG 
GGACGTTTTC GGGAGGATCT GGTCTTCCCG TATCCCGAGG AGTCGAAAGA GGAGCGGGAA 
AAGTGTGACG CGCTGCTGGC CGAGCTGGAA GCCTACCTCA AAAACGAACA TCCCTCCATT 
CTGATCGACC AGGAGCAGTA CATCCCGGAC TGGGTGCTGG AGCGCCTCTT CGAGATGGGC 
GTGATGGGGC TGACCATCCC CGAGGAATAC GGTGGCCTGG GGCTCGGCGT GACCAGCTAC 
AACCGCGTGT TGGAGCTGAT CGGCCGTTAC TGCGCCTCGA CGGCCGTGGT CGTCTCGGCC 
CACCAGTCGA TCGGCTGCAA GGCCATCATG CTGTTCGGGA CCGAGGAGCA GAAGCGGAAA 
TATCTGCCGA TCGTCGCCCG GGAAAAACTG GCCGCCTTCT GCCTTTCGGA GCCGAACGTG 
GGCTCGGACG CGGCCGGTCA GCAGACCCGC TGCGAGCTGA GCGAGGACGG TACCTACTAC 
ATCCTGAACG GCGAGAAGAA GTGGTCCACT TCGGGCGCGC TGGCCGGGGT GCTGACCGTG 
ATGGCCAAGC AGCGCCTGAA GAACCCGAAA ACCGGCAAGG AGGAAGACCG GGTGACGGCG 
TTGATCGTCA CGCCCGACAT GGAGGGCGTG GACGTGTTCG AGAAGAACCG CAGCAAGGCC 
GGGATCCGGG GCACCTGGCA GGCCCGCATC CGCTTCACGA ACGTAAAGGT CCCCCGCGAA 
AACCTTCTCT ACAAAGAGGG CAAAGGCCTG AACGTGGCGT TGAGCTGTCT CAACTACGGG 
CGCTGCACGC TGTCGGCTGG CGTGCTGGGC GGGGCCACCT GGGCCATGGA GCAGAGCACG 
AAGTGGGCGC AGACCCGCTA CCAGTTCGGC CGCCCGCTTG CCGACTTCGA GGCCGTGCAG 
CAGAAGATCG CCAAGATGGC GGCGCTGACC TATGGCATGC GGGCTATGCT CTACATGGTC 
ACGGGCATGC TCGACCGTCA GGATAAAGAC ATTATGATCG AGACGGCCGC CGCCAAGGTC 
TTCTGCTCGC AGATGGGCTG GGAGGTGATC GACGAGGCGA TGCAGATCAT GGGCGGCGAG 
GGCTACATGA CCGAAAACGA ACTGGAGCGG GTCTGGCGCG ACCACCGCAT TCATCGCATT 
GTGGAGGGGG CGAACGAGGT GATGCAGTCC TACATCTTCG CCTATGGCGG TAAGCAGCTT 
GCCGAGCAGA TGCTGGCCAT CAAGCAGGCG CTGGGCTGGG ATCGCGACCA GTCGCCTGTG 
GAGAACCTGC AGCGCATTGT CAGTAATGCG TTCAATCCGC GTCTGCTGAA GCGGGCACTG 
CCGCTGGCGG CCGAGCTGTT CCTGGGCATC CGGCCCGAAG CGCCCCGCAT CCGCCGCATG 
CATCCGAGCC TGCGCCCCTG GGCCGACCGC CTGGCCCGTC TGGTGCAGCA GCACTCGCAC 
TACTTCAAGC TGTTGAGCAA GTGGGAGGGC GATGCCATCG TGACCCGGCA GGCGCAGCAG 
GCACGCCTGG CCGACAACGC CATGTATCTG TTCGCGCTGA GCGCGGCGCT ATCGGACATG 
GACCGTCAGC TCCGCAAAGG CGCCTCCGGC GTGGCCTTCG AAAAGGACCG GGCCGCCTTC 
GAGCACCTGT TCGACCTACT GGAAATTCGC ATCCAGCAGA ACCTGGGTCT GTTGCGGCGC 
AACGCCGACG AGAGCATGCG TCGGGCCGCA CAGGCTACGT TGCGGTACGT CGACACGCTG 
CCCAACCGCG ACTACTACAT CCACGAGGCT TCGCCGGTGG CCAAAGGGAC AGGCAAGCCC 
GTGCAGAAAG AGCATATCAA GCAGTTCCCG GGCGACCGTT ACGTGACGGC GGGCGGCGAT 
GGGGCCCCCG CTGAATCGTC AGCCGCCCGC TCCGAAGCGT AG 

 

Protein sequence

MSLLSRLKGI SAQDRRMIED IEAMLGPEPE EMGFMKNLFW GRFREDLVFP YPEESKEERE 
KCDALLAELE AYLKNEHPSI LIDQEQYIPD WVLERLFEMG VMGLTIPEEY GGLGLGVTSY 
NRVLELIGRY CASTAVVVSA HQSIGCKAIM LFGTEEQKRK YLPIVAREKL AAFCLSEPNV 
GSDAAGQQTR CELSEDGTYY ILNGEKKWST SGALAGVLTV MAKQRLKNPK TGKEEDRVTA 
LIVTPDMEGV DVFEKNRSKA GIRGTWQARI RFTNVKVPRE NLLYKEGKGL NVALSCLNYG 
RCTLSAGVLG GATWAMEQST KWAQTRYQFG RPLADFEAVQ QKIAKMAALT YGMRAMLYMV 
TGMLDRQDKD IMIETAAAKV FCSQMGWEVI DEAMQIMGGE GYMTENELER VWRDHRIHRI 
VEGANEVMQS YIFAYGGKQL AEQMLAIKQA LGWDRDQSPV ENLQRIVSNA FNPRLLKRAL 
PLAAELFLGI RPEAPRIRRM HPSLRPWADR LARLVQQHSH YFKLLSKWEG DAIVTRQAQQ 
ARLADNAMYL FALSAALSDM DRQLRKGASG VAFEKDRAAF EHLFDLLEIR IQQNLGLLRR 
NADESMRRAA QATLRYVDTL PNRDYYIHEA SPVAKGTGKP VQKEHIKQFP GDRYVTAGGD 
GAPAESSAAR SEA