15 homologs were found in PanDaTox collection
for query gene Ppro_3842 on replicon NC_008608
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008608  Ppro_3842  CopG family transcriptional regulator  100 
 
 
84 aa  167  6e-41  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1116  CopG family transcriptional regulator  47.56 
 
 
83 aa  78.6  0.00000000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2717  CopG family transcriptional regulator  47.44 
 
 
83 aa  72  0.000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0720  transcriptional regulator, CopG family  47.22 
 
 
89 aa  68.2  0.00000000004  Chlorobium phaeobacteroides BS1  Bacteria  normal  unclonable  0.0000059078 
 
 
-
 
NC_008009  Acid345_3557  CopG family transcriptional regulator  35 
 
 
82 aa  62.8  0.000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0445  helix-turn-helix protein, CopG  48.15 
 
 
80 aa  59.7  0.00000001  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.00000022622  n/a   
 
 
-
 
NC_011060  Ppha_1179  transcriptional regulator, CopG family  39.47 
 
 
86 aa  54.7  0.0000004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3676  hypothetical protein  47.06 
 
 
79 aa  53.9  0.0000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2607  CopG family transcriptional regulator  36.84 
 
 
79 aa  50.1  0.00001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.472801 
 
 
-
 
NC_013421  Pecwa_0944  transcriptional regulator, CopG family  36.23 
 
 
81 aa  49.3  0.00002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.129226  n/a   
 
 
-
 
NC_012912  Dd1591_2452  transcriptional regulator, CopG family  41.82 
 
 
81 aa  48.1  0.00004  Dickeya zeae Ech1591  Bacteria  normal  0.0142627  n/a   
 
 
-
 
NC_008686  Pden_0145  CopG family transcriptional regulator  38.46 
 
 
89 aa  47.8  0.00005  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03468  transcriptional regulator, CopG family  32 
 
 
82 aa  45.4  0.0002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3519  transcriptional regulator, CopG family  35.29 
 
 
82 aa  43.1  0.001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0055  CopG family transcriptional regulator  30.14 
 
 
82 aa  42.7  0.002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
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