| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3676 |
|---|
| Symbol | |
|---|
| ID | 1185341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4143187 |
|---|
| End bp | 4143426 |
|---|
| Gene Length | 240 bp |
|---|
| Protein Length | 79 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637395023 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_793450 |
|---|
| Protein GI | 28870831 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3905] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTTA TGTCTCTACG CCTGCCGGAC GAGATGGCAG ATACCCTTGC ACACCTCGCC
AAAGCGACCG GCCGCAGCAA GTCGTTTTTG GCCTTGAACG CATTACGTGA ATACTTGACT
CGCGAAGCCT GGCAGATTGC CGAAATTCAG CGTGCAATTG AAGAAGCAGA CGCGGGCGAG
TTCGCAAGTG AAGAAGATGT AAAGGCAGTG ATGAATAAAT GGGCGAACAA TGCAGGTTGA
|
|---|
| Protein sequence | MSVMSLRLPD EMADTLAHLA KATGRSKSFL ALNALREYLT REAWQIAEIQ RAIEEADAGE
FASEEDVKAV MNKWANNAG
|
|---|
| |