20 homologs were found in PanDaTox collection
for query gene Ppro_0721 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_0721  FmdB family regulatory protein  100 
 
 
164 aa  335  9.999999999999999e-92  Pelobacter propionicus DSM 2379  Bacteria  normal  0.538439  n/a   
 
 
-
 
NC_007517  Gmet_2576  cytochrome c family protein, putative  75.46 
 
 
162 aa  261  3e-69  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00231924  normal 
 
 
-
 
NC_002939  GSU2748  cytochrome c family protein, putative  65.64 
 
 
181 aa  229  1e-59  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3176  FmdB family regulatory protein  33.16 
 
 
190 aa  84.7  5e-16  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4161  FmdB family regulatory protein  32.12 
 
 
125 aa  64.7  0.0000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00024614  n/a   
 
 
-
 
NC_009523  RoseRS_3407  FmdB family regulatory protein  33.58 
 
 
142 aa  62.8  0.000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.200356  normal  0.535647 
 
 
-
 
NC_009767  Rcas_1521  FmdB family regulatory protein  33.58 
 
 
141 aa  62.4  0.000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.10251 
 
 
-
 
NC_008554  Sfum_1903  FmdB family regulatory protein  35.85 
 
 
121 aa  57.8  0.00000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.056161  unclonable  0.00000844821 
 
 
-
 
NC_011831  Cagg_3239  regulatory protein, FmdB family  27.59 
 
 
129 aa  57.4  0.00000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.688496  normal 
 
 
-
 
NC_013223  Dret_0170  hypothetical protein  36.11 
 
 
369 aa  51.6  0.000005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.794251 
 
 
-
 
NC_013223  Dret_2281  regulatory protein, FmdB family  25.56 
 
 
118 aa  48.5  0.00004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2352  FmdB family regulatory protein  43.48 
 
 
83 aa  43.5  0.001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1009  hypothetical protein  38.18 
 
 
73 aa  43.1  0.002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0112421  normal  0.0977193 
 
 
-
 
NC_011206  Lferr_0056  regulatory protein, FmdB family  33.33 
 
 
85 aa  42.7  0.002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.00717185  normal 
 
 
-
 
NC_011761  AFE_0055  hypothetical protein  33.33 
 
 
85 aa  42.7  0.002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.130554  n/a   
 
 
-
 
NC_010524  Lcho_1427  FmdB family regulatory protein  43.48 
 
 
80 aa  41.6  0.005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013889  TK90_0512  regulatory protein, FmdB family  38 
 
 
94 aa  41.2  0.006  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_2088  regulatory protein, FmdB family  42.31 
 
 
79 aa  41.2  0.007  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1219  regulatory protein, FmdB family  39.13 
 
 
76 aa  40.8  0.008  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  hitchhiker  0.00000000778963 
 
 
-
 
NC_011761  AFE_1501  hypothetical protein  39.13 
 
 
76 aa  40.8  0.008  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
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