Gene Cagg_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3239 
Symbol 
ID7267386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3924693 
End bp3925082 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content55% 
IMG OID643568060 
Productregulatory protein, FmdB family 
Protein accessionYP_002464533 
Protein GI219850100 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.688496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCT ATGAATACAT ATGCCCGGCT TGTAATGGGC AGTTTCAAAA ACTAGTACAC 
GGATTTAGCG ATCCGGCCGG TTTGGCCTGC CCGCGTTGTG GGAATACCGA GGTTCGCCGG
GCGATTTCGC GTTTTGCGAC TCTCAAGTCA GAAGATGACC GGATCGAATC GCTGGCCGAT
CCGGCAAACT TTATGGGGCT TGACGAAAGC GATCCGCGAT CGATTGCCCG TTGGGCAAAA
CGTCTGGGGA AGGAGCTAGG TGAAGATGCC GGTGAAGATT GGGACGAGAT GGTCGATCAG
ATGCTCGAAG AAGAGCTAAG CGGCAAGAAG GACGAGGACG ATAGTGGTAG TGGTTCGACC
GGTAAGCCCG ATGATCTCGG CTGGGCCTAA
 
Protein sequence
MPIYEYICPA CNGQFQKLVH GFSDPAGLAC PRCGNTEVRR AISRFATLKS EDDRIESLAD 
PANFMGLDES DPRSIARWAK RLGKELGEDA GEDWDEMVDQ MLEEELSGKK DEDDSGSGST
GKPDDLGWA