Gene Sfum_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1903 
Symbol 
ID4459774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2321755 
End bp2322120 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content66% 
IMG OID639702670 
ProductFmdB family regulatory protein 
Protein accessionYP_846023 
Protein GI116749336 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.056161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000844821 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCCATTT ACGAATTCCG GTGCAGTCGA TGCGGCAGGA AGAGCGAGAT TCTCACGCTG 
CGGGTGTCCG AAGCCTTCTC GCCCGTCTGC AAACACTGCA GCAGCGAGGA AGTGGCGCGC
GTGCCCTCGC GGGTTCGCGT GCGGCTCTCC GAGGAGACCC GCCTCGAACG CCTGGCGGAC
CCGTCGCGAT TCGCGGGACT GGATGAGAAC GACCCGAAGA GCATGGCCCG GTGGATGAAG
GAAATGGGCC GCGAGATGGG GGACGACCTC GGCGCCGAGG ACGTCGACGC GCTCGTGGAC
GAAGCCATGG CCGAAGGAGA TGCCGCGGCC CAAACGGGCG CCGGGTTCGG CGATGACGAC
CTGTAA
 
Protein sequence
MPIYEFRCSR CGRKSEILTL RVSEAFSPVC KHCSSEEVAR VPSRVRVRLS EETRLERLAD 
PSRFAGLDEN DPKSMARWMK EMGREMGDDL GAEDVDALVD EAMAEGDAAA QTGAGFGDDD
L