| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2088 |
|---|
| Symbol | |
|---|
| ID | 8492097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 2082429 |
|---|
| End bp | 2082668 |
|---|
| Gene Length | 240 bp |
|---|
| Protein Length | 79 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646360077 |
|---|
| Product | regulatory protein, FmdB family |
|---|
| Protein accession | YP_003240015 |
|---|
| Protein GI | 260893918 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATTT TCGAGTTCAA GTGTTCTGAC TGCGGGCACC TGTTTGAAAA GCTTTTCCTC
GATTCCAAAG AGGAAGTGGT ACTCGAGTGC CCCCAGTGCC ACTCGCACAA CTTGGAGCGG
GTCGTGAGCC GGGTAAACTA CGTGATGGGA ACCAAGGGAA AAGGTCCTAA GATTACCACC
AAATCCTGCG GTCCGGGCAG CACCTGCGCC ACCATCGAAA TTCCCGGGAG GGATGATTAA
|
|---|
| Protein sequence | MPIFEFKCSD CGHLFEKLFL DSKEEVVLEC PQCHSHNLER VVSRVNYVMG TKGKGPKITT
KSCGPGSTCA TIEIPGRDD
|
|---|
| |