17 homologs were found in PanDaTox collection
for query gene Dret_2281 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013223  Dret_2281  regulatory protein, FmdB family  100 
 
 		 118 aa  240  5e-63  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_1903  FmdB family regulatory protein  47.27 
 
 		 121 aa  94.7  4e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.056161  unclonable  0.00000844821 
 
 
-
 
NC_009523  RoseRS_3407  FmdB family regulatory protein  39.17 
 
 		 142 aa  81.3  0.000000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.200356  normal  0.535647 
 
 
-
 
NC_011831  Cagg_3239  regulatory protein, FmdB family  43.4 
 
 		 129 aa  80.1  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.688496  normal  1 
 
 
-
 
NC_009767  Rcas_1521  FmdB family regulatory protein  40.19 
 
 		 141 aa  77  0.00000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.10251 
 
 
-
 
NC_009972  Haur_4161  FmdB family regulatory protein  36.79 
 
 		 125 aa  70.5  0.000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00024614  n/a   
 
 
-
 
NC_002939  GSU2748  cytochrome c family protein, putative  25.76 
 
 		 181 aa  52.8  0.000002  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_0721  FmdB family regulatory protein  25.56 
 
 		 164 aa  48.5  0.00003  Pelobacter propionicus DSM 2379  Bacteria  normal  0.538439  n/a   
 
 
-
 
NC_007760  Adeh_1561  hypothetical protein  44.9 
 
 		 104 aa  47  0.00008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.266221  n/a   
 
 
-
 
NC_011145  AnaeK_2303  regulatory protein, FmdB family  44.9 
 
 		 109 aa  46.6  0.0001  Anaeromyxobacter sp. K  Bacteria  normal  0.0327558  n/a   
 
 
-
 
NC_011891  A2cp1_2391  regulatory protein, FmdB family  44.9 
 
 		 109 aa  46.6  0.0001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.873408  n/a   
 
 
-
 
NC_007517  Gmet_2576  cytochrome c family protein, putative  24.63 
 
 		 162 aa  47  0.0001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00231924  normal  1 
 
 
-
 
NC_009675  Anae109_2482  FmdB family regulatory protein  50 
 
 		 65 aa  44.7  0.0005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.416517  normal  0.0908176 
 
 
-
 
NC_011145  AnaeK_2577  regulatory protein, FmdB family  47.73 
 
 		 66 aa  42.7  0.002  Anaeromyxobacter sp. K  Bacteria  normal  0.923683  n/a   
 
 
-
 
NC_011891  A2cp1_2673  regulatory protein, FmdB family  47.73 
 
 		 66 aa  42.7  0.002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0890211  n/a   
 
 
-
 
NC_009455  DehaBAV1_0665  FmdB family regulatory protein  29.63 
 
 		 128 aa  41.6  0.004  Dehalococcoides sp. BAV1  Bacteria  unclonable  0.000000000563996  n/a   
 
 
-
 
NC_013216  Dtox_0773  regulatory protein, FmdB family  37.21 
 
 		 84 aa  41.6  0.004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
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