64 homologs were found in PanDaTox collection
for query gene Gdia_3402 on replicon NC_011365
Organism: Gluconacetobacter diazotrophicus PAl 5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011365  Gdia_3402  Substrate-binding region of ABC-type glycine betaine transport system  100 
 
 		 252 aa  505  9.999999999999999e-143  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011313  VSAL_II0181  ABC-type glycine betaine transport system,substrate binding domain  30.95 
 
 		 258 aa  122  6e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_1959  ABC transporter, periplasmic substrate-binding protein, putative  30.83 
 
 		 303 aa  101  1e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009953  Sare_3644  substrate-binding region of ABC-type glycine betaine transport system  31.05 
 
 		 266 aa  97.8  1e-19  Salinispora arenicola CNS-205  Bacteria  normal  0.471814  hitchhiker  0.00574343 
 
 
-
 
NC_007951  Bxe_A2688  proline/glycine betaine ABC transporter periplasmic-ligand binding protein  28.28 
 
 		 259 aa  94  2e-18  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II1159  ABC transporter, periplasmic substrate-binding protein, putative  29.72 
 
 		 268 aa  87.8  1e-16  Burkholderia thailandensis E264  Bacteria  normal  0.65061  n/a   
 
 
-
 
NC_010625  Bphy_6868  substrate-binding region of ABC-type glycine betaine transport system  26.58 
 
 		 293 aa  61.2  0.00000002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009637  MmarC7_0111  substrate-binding region of ABC-type glycine betaine transport system  22.98 
 
 		 295 aa  58.2  0.0000001  Methanococcus maripaludis C7  Archaea  normal  0.671517  normal  0.246313 
 
 
-
 
NC_007492  Pfl01_1606  substrate-binding region of ABC-type glycine betaine transport system  28.34 
 
 		 283 aa  58.2  0.0000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.823452  normal  0.632336 
 
 
-
 
NC_013223  Dret_1056  Substrate-binding region of ABC-type glycine betaine transport system  25.56 
 
 		 305 aa  57.8  0.0000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.511062  normal  0.0333795 
 
 
-
 
NC_008751  Dvul_0958  substrate-binding region of ABC-type glycine betaine transport system  28.02 
 
 		 285 aa  56.6  0.0000003  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.00282078  normal  0.248441 
 
 
-
 
NC_008392  Bamb_5760  substrate-binding region of ABC-type glycine betaine transport system  25.22 
 
 		 293 aa  56.6  0.0000003  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_01110  ABC-type proline/glycine betaine transport system, periplasmic component  26.54 
 
 		 299 aa  56.2  0.0000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_4049  Substrate-binding region of ABC-type glycine betaine transport system  27.36 
 
 		 298 aa  55.8  0.0000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_1622  glycine betaine-binding protein, putative  24.5 
 
 		 328 aa  55.1  0.000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_0671  substrate-binding region of ABC-type glycine betaine transport system  22.6 
 
 		 295 aa  53.9  0.000002  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_3758  substrate-binding region of ABC-type glycine betaine transport system  24.1 
 
 		 284 aa  54.7  0.000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.597839  normal  0.109477 
 
 
-
 
NC_013173  Dbac_3319  Substrate-binding region of ABC-type glycine betaine transport system  24.65 
 
 		 279 aa  53.5  0.000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.28138  n/a   
 
 
-
 
NC_009975  MmarC6_1790  substrate-binding region of ABC-type glycine betaine transport system  23.51 
 
 		 295 aa  53.5  0.000003  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_008820  P9303_16971  ABC transporter substrate binding protein, glycine betaine/proline family protein  25.77 
 
 		 284 aa  53.9  0.000003  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.632317 
 
 
-
 
NC_009512  Pput_3978  substrate-binding region of ABC-type glycine betaine transport system  26.74 
 
 		 286 aa  52.8  0.000005  Pseudomonas putida F1  Bacteria  normal  0.508806  normal  0.725555 
 
 
-
 
NC_002947  PP_1741  substrate-binding region of ABC-type glycine betaine transport system  26.74 
 
 		 287 aa  52.8  0.000005  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2928  glycine betaine transport system permease protein  26.29 
 
 		 313 aa  51.6  0.00001  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_1557  twin-arginine translocation pathway signal  26.45 
 
 		 313 aa  51.2  0.00001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.254611  n/a   
 
 
-
 
NC_011769  DvMF_1043  Substrate-binding region of ABC-type glycine betaine transport system  28.41 
 
 		 287 aa  51.6  0.00001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_010322  PputGB1_1333  substrate-binding region of ABC-type glycine betaine transport system  26.6 
 
 		 286 aa  50.8  0.00002  Pseudomonas putida GB-1  Bacteria  normal  0.606509  normal  1 
 
 
-
 
NC_009634  Mevan_0054  substrate-binding region of ABC-type glycine betaine transport system  21.96 
 
 		 294 aa  50.4  0.00002  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
-
 
NC_007963  Csal_3169  substrate-binding region of ABC-type glycine betaine transport system  26.26 
 
 		 284 aa  50.4  0.00003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_1291  substrate-binding region of ABC-type glycine betaine transport system  25.53 
 
 		 286 aa  49.3  0.00005  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_0503  ABC glycine betaine/L-proline transporter, substrate-binding subunit  22.36 
 
 		 290 aa  49.3  0.00006  Methanococcoides burtonii DSM 6242  Archaea  normal  0.123581  n/a   
 
 
-
 
NC_011728  BbuZS7_0144  glycine betaine, L-proline ABC transporter, glycine/betaine/L-proline-binding protein  22.6 
 
 		 290 aa  48.1  0.0001  Borrelia burgdorferi ZS7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_0905  Substrate-binding region of ABC-type glycine betaine transport system  25 
 
 		 283 aa  47  0.0003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.121649  normal  1 
 
 
-
 
NC_004311  BRA0738  glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative  24.59 
 
 		 288 aa  46.6  0.0003  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_0517  Substrate-binding region of ABC-type glycine betaine transport system  30.3 
 
 		 299 aa  46.6  0.0004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.492538 
 
 
-
 
NC_007963  Csal_3102  substrate-binding region of ABC-type glycine betaine transport system  26.32 
 
 		 286 aa  46.2  0.0004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_3488  substrate-binding region of ABC-type glycine betaine transport system  24.51 
 
 		 303 aa  46.2  0.0005  Salinispora arenicola CNS-205  Bacteria  normal  0.15074  normal  0.0153666 
 
 
-
 
NC_011830  Dhaf_2308  Substrate-binding region of ABC-type glycine betaine transport system  22 
 
 		 298 aa  45.8  0.0007  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00541806  n/a   
 
 
-
 
NC_007519  Dde_0675  glycine/betaine/L-proline ABC transporter, periplasmic-binding protein  26.34 
 
 		 279 aa  45.4  0.0008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000223596  n/a   
 
 
-
 
NC_007963  Csal_0219  ABC-type glycine betaine transport system protein  30.41 
 
 		 322 aa  45.4  0.0009  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_3733  substrate-binding region of ABC-type glycine betaine transport system  25.13 
 
 		 278 aa  44.7  0.001  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.409518 
 
 
-
 
NC_009668  Oant_3887  substrate-binding region of ABC-type glycine betaine transport system  24.04 
 
 		 288 aa  44.3  0.002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.326958  n/a   
 
 
-
 
NC_008942  Mlab_1062  hypothetical protein  22.49 
 
 		 298 aa  43.9  0.002  Methanocorpusculum labreanum Z  Archaea  normal  1  normal  1 
 
 
-
 
NC_011883  Ddes_0822  Substrate-binding region of ABC-type glycine betaine transport system  25.14 
 
 		 287 aa  44.3  0.002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21490  Substrate-binding region of ABC-type glycine betaine transport system  24.32 
 
 		 285 aa  43.9  0.002  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0889  Substrate-binding region of ABC-type glycine betaine transport system  21.88 
 
 		 317 aa  44.3  0.002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  unclonable  0.000000000000869689  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0580  ABC proline/glycine betaine transporter, periplasmic ligand binding protein  23.62 
 
 		 287 aa  43.9  0.002  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009078  BURPS1106A_A0749  quaternary amine ABC transporter periplasmic substrate-binding protein  24.1 
 
 		 287 aa  43.9  0.003  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA0480  ABC transporter, periplasmic glycine/betaine-binding protein  24.1 
 
 		 287 aa  43.9  0.003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.84845  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2117  ABC transporter, periplasmic glycine/betaine-binding protein  24.1 
 
 		 287 aa  43.9  0.003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.480909  n/a   
 
 
-
 
NC_009079  BMA10247_A1970  quaternary amine ABC transporter periplasmic substrate-binding protein  24.1 
 
 		 287 aa  43.9  0.003  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A0837  quaternary amine ABC transporter periplasmic substrate-binding protein  24.1 
 
 		 287 aa  43.9  0.003  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_0997  quaternary amine ABC transporter periplasmic substrate-binding protein  24.1 
 
 		 287 aa  43.9  0.003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.166276  n/a   
 
 
-
 
NC_008784  BMASAVP1_0701  quaternary amine ABC transporter periplasmic substrate-binding protein  24.1 
 
 		 287 aa  43.9  0.003  Burkholderia mallei SAVP1  Bacteria  normal  0.504672  n/a   
 
 
-
 
NC_007963  Csal_1901  substrate-binding region of ABC-type glycine betaine transport system  24.4 
 
 		 294 aa  43.5  0.003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.135733  n/a   
 
 
-
 
NC_010552  BamMC406_5013  substrate-binding region of ABC-type glycine betaine transport system  22.61 
 
 		 287 aa  43.1  0.004  Burkholderia ambifaria MC40-6  Bacteria  normal  0.773221  normal  1 
 
 
-
 
NC_007650  BTH_II1859  ABC transporter, periplasmic glycine/betaine-binding protein  24.62 
 
 		 287 aa  43.1  0.004  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5076  substrate-binding region of ABC-type glycine betaine transport system  23.12 
 
 		 287 aa  42.7  0.005  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004116  SAG1796  amino acid ABC transporter, permease protein  25.51 
 
 		 575 aa  43.1  0.005  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.135141  n/a   
 
 
-
 
NC_008061  Bcen_3292  substrate-binding region of ABC-type glycine betaine transport system  23.12 
 
 		 287 aa  42.7  0.005  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_4488  substrate-binding region of ABC-type glycine betaine transport system  22.61 
 
 		 287 aa  42.7  0.006  Burkholderia ambifaria AMMD  Bacteria  normal  0.515487  normal  1 
 
 
-
 
NC_010725  Mpop_3986  Substrate-binding region of ABC-type glycine betaine transport system  25.48 
 
 		 215 aa  42.7  0.006  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2490  substrate-binding region of ABC-type glycine betaine transport system  25.21 
 
 		 278 aa  42.7  0.006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.962073 
 
 
-
 
NC_007963  Csal_2886  substrate-binding region of ABC-type glycine betaine transport system  22.97 
 
 		 286 aa  42  0.01  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.664803  n/a   
 
 
-
 
NC_010086  Bmul_3556  substrate-binding region of ABC-type glycine betaine transport system  22.11 
 
 		 287 aa  42  0.01  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>