| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1622 |
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| Symbol | |
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| ID | 1183259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1779033 |
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| End bp | 1780019 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392994 |
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| Product | glycine betaine-binding protein, putative |
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| Protein accession | NP_791447 |
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| Protein GI | 28868828 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACGG TCGCATTTGC TGCGTGTCAC TGCGCGTGGC GGCGATCAAA GCGTGCGGGG
TGTGGGAGCG GTCTTGAAAA CAACGTTGAC GAAGCCCGAC AACCGTCGGT GCAGACTTCC
GGGGAAGCGA TAATGATGAT GCGAAAAATA CTGGGGGCGG GTGCCGCTCT GGTACTTGCG
GTCAGCTCCA CGCTAGCGAT TGCTGAAACC AAAACCCTGA CCATCGGCTA TGTAGAAGGC
TGGTCCGACA GCGTGGCAAC GACCTTCGTG GCCTCCGAGG TGATCAAGCA GAAGCTGGGC
TACGACGTCA AACTGCAGTC AGTCGCGGCC GGGATCATGT GGCAGGCAGT GGCGACCGAC
AAGCTGGACC TGATGCTGTC TGCCTGGCTT CCGGGCACTC ACGGTGAGTA CTACACCAAG
TACAAGGACC AGGTCGTCAA CTATGGCCCC AACTTCAAGG ACGCGAAGAT CGGCCTGATC
GTGCCCGAGT ATGTAAAAGC CAAAAGCATC GAAGACCTGA AGACCGACGC CTCCTTCAAC
AAGAAGATCA CCGGGATCGA TGCGGGCTCG GGCGTGATGC TCAAGACCGA TCAGGCCATC
AAGGATTACG GCCTGGATGG CTACAAACTG CAGGCCAGTT CCGGCGCAGG CATGATTGCC
GAGCTGACCC GCGCCGAGAA GGCGCAAAAG GCCATCGTGG TGACGGGCTG GGTACCGCAC
TGGATGTTCG CCAAGTGGAA ACTGCGTTTC CTCGACGACC CTAAAGGCGT CTATGGCGCT
GCTGAAACTG TCGATAACGT CGCCAGCCTG ACGCTTGAGA AAAAAGCGCC GGAAGTCGTC
GCCTTCCTGA AAAAATTTCA GTGGGCCTCC AAGGATGAAA TCGGTGAAGT GATGCTGGCT
ATTCAGGACG GTGCCAAGCC CGAAGCTGCC GCAAAGGACT GGGTGGCCAA GCACCCGGAC
CGGGTCGCTG CATGGACCGC TAAATAG
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| Protein sequence | MITVAFAACH CAWRRSKRAG CGSGLENNVD EARQPSVQTS GEAIMMMRKI LGAGAALVLA
VSSTLAIAET KTLTIGYVEG WSDSVATTFV ASEVIKQKLG YDVKLQSVAA GIMWQAVATD
KLDLMLSAWL PGTHGEYYTK YKDQVVNYGP NFKDAKIGLI VPEYVKAKSI EDLKTDASFN
KKITGIDAGS GVMLKTDQAI KDYGLDGYKL QASSGAGMIA ELTRAEKAQK AIVVTGWVPH
WMFAKWKLRF LDDPKGVYGA AETVDNVASL TLEKKAPEVV AFLKKFQWAS KDEIGEVMLA
IQDGAKPEAA AKDWVAKHPD RVAAWTAK
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