Gene Tfu_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2928 
Symbol 
ID3580194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp3442127 
End bp3443068 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content66% 
IMG OID637686657 
Productglycine betaine transport system permease protein 
Protein accessionYP_290984 
Protein GI72163327 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACCCA CCAAGCGCAC CCGGCGCTTC GCCACGGTTG CTGCTGGACT TACTTCATTG 
GTCCTGCTGG CCACTGCCTG CGGAGGAGAC GGGGGTAGCG GCCTGGCGGG CGGAGACGAA
GCTTCGGGGC ACGACGGCAA ACAGATTGAG ATCGCCCTCA TCCCGTGGGA AGAAGCCATC
GCTACCACCC ACATGTGGAA GGTGATCCTC GAAGAACTCG ACTACGAGGT GACGATCACC
GAGGTCGACG TGGCGCCCAT GTACCAGGGG GTGGCCAACG GCGACATCGA CATGTTCCTG
GACACGTGGC TTCCTCTCAC CCACGGCGAC TACTGGGAGG AGTACGGCGA GCAGGTGGAG
GACCTCGGCG CCTGGTACGA CAACGCGGTG CTGACCCTCA CCGTCCCCTC GTATGTGGAC
GAGGTGGACT CCATCGCCGA CCTGGCCGAC CACGCCGACC TGTTCGGCGG CCGGATCGTC
GGTATCGAAT CCGGGTCGGG CCTGGTGCGT ACCACTAAGG AAGAGGCGAT CCCCACCTAC
GGCCTGGACG ACTACGAGCT GATCGAGTCC TCGACCGCGG CGATGCTCGC CGAGCTGGAC
TCGGCGATCT CCGACGAGGA GCCGATCGTG GTCACCTTGT GGCGGCCGCA CATCGCCTAC
GCCCAGTACG ACCTGAAGGA CCTGGAGGAC CCTGAAGGCG CGATGGGCGG CGCGGAGGAG
ATCCACGCTG TGGGCCGCAA GGGCTTCAGC GAGGACTTCC CCGAGCTCGC CGAGTGGCTC
CGCAACTTCG AGCTCAGCGA CGAAGAGTTG AGCTCCTTGG AACAGGCCGT GCTCGCTGAC
CACGAGGACG ACCCGGAGGC GGGGGCCCGC GAGTGGCTGA CCGCCAACCC CGAGTTCCTC
GAGCGCACCC TGGGTGACGC GGCGAAGGAC CTCTCCTTCT GA
 
Protein sequence
MKPTKRTRRF ATVAAGLTSL VLLATACGGD GGSGLAGGDE ASGHDGKQIE IALIPWEEAI 
ATTHMWKVIL EELDYEVTIT EVDVAPMYQG VANGDIDMFL DTWLPLTHGD YWEEYGEQVE
DLGAWYDNAV LTLTVPSYVD EVDSIADLAD HADLFGGRIV GIESGSGLVR TTKEEAIPTY
GLDDYELIES STAAMLAELD SAISDEEPIV VTLWRPHIAY AQYDLKDLED PEGAMGGAEE
IHAVGRKGFS EDFPELAEWL RNFELSDEEL SSLEQAVLAD HEDDPEAGAR EWLTANPEFL
ERTLGDAAKD LSF