Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_0054 |
Symbol | |
ID | 5325451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | + |
Start bp | 52556 |
End bp | 53440 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640785722 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001322580 |
Protein GI | 150398813 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTATA AAGCATTACT TATGATTCCA ATCTTAAGTT TGGCTTTACT TTTTTCAGGC TGTCTTAATG CTTCTGAAAA TAATGATTCC GAACAAAAAT CACTGAATTT AGGACTTCCC CCATGGCCGG GAGTTACCGT TAAATCAAAC GTTGTAAAAG TTATTCTTGA AGAAAAAGGC TATGCTGTAA AATTAAATTC ACTTGATGCA GGACTTGTTT ACGCAAAACT TGCAGAAGGG GAACTTGATG TACTTCTTGC AGGATGGCTA CCTGCAACCC ATGAAAATTA CTGGAACCAG TACGGTGACC AGTTAGATAA AGTAAATGTA AACGTTGAAA AAACTGCACT CGGACTTGCG GTTCCAAGGC ATACATATGA ATCAGGTATT CAATCGATTA CTGATTTGAA AGGTAATGGA AAAATATTTA ATAGTAGAAT CGTAGGGATT GAACCTGGTG CAGGTATCAT GTCAAATACT GAAAATGCAA TTGAAATTTA TGGATTAGAA AATTATGAAT TAAAGTCAAG TAGTACGCCC GCTATGATGG CAGAACTAGA ACGGGCATTT AATAGAAATG AAAATATTAT CGTAACAGTC TGGGAACCTC ACTCCGTTTT CTTCAGGTTT GATATAGTAA TGCTAGACGA CCCTGAAAGA GTATATGGGG ATGGGGATAA AGTATATACC ATTGCAAGAA AAGGTCTTGA AAGTGACGAT CCAGTTCTCT ATGAATTTTT TAAAAAATTC AAAATTACGC CAGAAATTCA AAGTGGATGG ATATACGAAT ATAGTGATGA AGGAAGAAAT CCTGAAGATG TTGCAAGAGA ATGGGTTAGG AATAATTCTG AAATAGTATC TGAGTGGACT TCCCATATGA ATTAA
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Protein sequence | MNYKALLMIP ILSLALLFSG CLNASENNDS EQKSLNLGLP PWPGVTVKSN VVKVILEEKG YAVKLNSLDA GLVYAKLAEG ELDVLLAGWL PATHENYWNQ YGDQLDKVNV NVEKTALGLA VPRHTYESGI QSITDLKGNG KIFNSRIVGI EPGAGIMSNT ENAIEIYGLE NYELKSSSTP AMMAELERAF NRNENIIVTV WEPHSVFFRF DIVMLDDPER VYGDGDKVYT IARKGLESDD PVLYEFFKKF KITPEIQSGW IYEYSDEGRN PEDVAREWVR NNSEIVSEWT SHMN
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