Gene PputW619_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1291 
Symbol 
ID6110219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1430814 
End bp1431674 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content61% 
IMG OID641621065 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_001748165 
Protein GI170720477 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTT TGAAAAAAAT GCGACGACTC CTGGGGGCGG GCACCGCCCT GGTACTGGCC 
ATGAGCGCTG CTCAGGCCAT GGCCAAAGAA GTGAGCATCG GTTACGTGGA TGGCTGGGCC
GACAGCGTGG CGACCACCAA CGTGGCCGCC GAAGTGATCA AGCAGAAACT CGGCTACGAC
GTGAAGCTGC AGGCCGTGGC CACCGGCATC ATGTGGCAGG GTGTGGCCAC CGGCAAACTC
GACGCCATGC TCTCGGCCTG GTTGCCGGTG ACCCATGGTG AGTACTGGAC CAAGAACAAG
GACAACGTGG TCGATTACGG CGCCAACTTC AAGGATGCCA AGATCGGCCT GATCGTTCCG
GAGTACGTCA AGGCCAACAG CATTACCGAC CTCAAGACCG ATGAAAGCTT CAAGCAGAAG
ATCGTCGGCA TCGACGCAGG CTCCGGGGTA ATGCTCAAGA CCGACCAGGC CATCAAAGAC
TACGAACTTA CCGGCTACAA GCTGCAGGCA AGCTCCGGCG CGGCGATGAC CGCCGAACTG
GGCCGCGCCT ACGCCAAGCA GCAGTCCATT GCCGTGACCG GCTGGGTGCC GCACTGGATG
TTCGCCAAGT GGAAGCTGAA GTTCCTCGAA GACCCCAAAG GTGTCTACGG TGCCGCCGAG
ACGGTCAACA GCATCGGCAG CAAGGAGCTG GCGACCAAGG CGCCGGAAGT GGCCGAGTTC
CTGAAGAAGT TCAGTTGGCA GTCCAAGGAT GAGATCGGCG AGGTGATGCT GGCGATTCAG
GAAGGCGCCA AGCCTGAAGC GGCGGCCAAG GACTGGGTGG CCAAGCACCC GGACCGAGTC
AAGGAGTGGA CTGGCAAGTA A
 
Protein sequence
MATLKKMRRL LGAGTALVLA MSAAQAMAKE VSIGYVDGWA DSVATTNVAA EVIKQKLGYD 
VKLQAVATGI MWQGVATGKL DAMLSAWLPV THGEYWTKNK DNVVDYGANF KDAKIGLIVP
EYVKANSITD LKTDESFKQK IVGIDAGSGV MLKTDQAIKD YELTGYKLQA SSGAAMTAEL
GRAYAKQQSI AVTGWVPHWM FAKWKLKFLE DPKGVYGAAE TVNSIGSKEL ATKAPEVAEF
LKKFSWQSKD EIGEVMLAIQ EGAKPEAAAK DWVAKHPDRV KEWTGK