Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1291 |
Symbol | |
ID | 6110219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1430814 |
End bp | 1431674 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641621065 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001748165 |
Protein GI | 170720477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTT TGAAAAAAAT GCGACGACTC CTGGGGGCGG GCACCGCCCT GGTACTGGCC ATGAGCGCTG CTCAGGCCAT GGCCAAAGAA GTGAGCATCG GTTACGTGGA TGGCTGGGCC GACAGCGTGG CGACCACCAA CGTGGCCGCC GAAGTGATCA AGCAGAAACT CGGCTACGAC GTGAAGCTGC AGGCCGTGGC CACCGGCATC ATGTGGCAGG GTGTGGCCAC CGGCAAACTC GACGCCATGC TCTCGGCCTG GTTGCCGGTG ACCCATGGTG AGTACTGGAC CAAGAACAAG GACAACGTGG TCGATTACGG CGCCAACTTC AAGGATGCCA AGATCGGCCT GATCGTTCCG GAGTACGTCA AGGCCAACAG CATTACCGAC CTCAAGACCG ATGAAAGCTT CAAGCAGAAG ATCGTCGGCA TCGACGCAGG CTCCGGGGTA ATGCTCAAGA CCGACCAGGC CATCAAAGAC TACGAACTTA CCGGCTACAA GCTGCAGGCA AGCTCCGGCG CGGCGATGAC CGCCGAACTG GGCCGCGCCT ACGCCAAGCA GCAGTCCATT GCCGTGACCG GCTGGGTGCC GCACTGGATG TTCGCCAAGT GGAAGCTGAA GTTCCTCGAA GACCCCAAAG GTGTCTACGG TGCCGCCGAG ACGGTCAACA GCATCGGCAG CAAGGAGCTG GCGACCAAGG CGCCGGAAGT GGCCGAGTTC CTGAAGAAGT TCAGTTGGCA GTCCAAGGAT GAGATCGGCG AGGTGATGCT GGCGATTCAG GAAGGCGCCA AGCCTGAAGC GGCGGCCAAG GACTGGGTGG CCAAGCACCC GGACCGAGTC AAGGAGTGGA CTGGCAAGTA A
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Protein sequence | MATLKKMRRL LGAGTALVLA MSAAQAMAKE VSIGYVDGWA DSVATTNVAA EVIKQKLGYD VKLQAVATGI MWQGVATGKL DAMLSAWLPV THGEYWTKNK DNVVDYGANF KDAKIGLIVP EYVKANSITD LKTDESFKQK IVGIDAGSGV MLKTDQAIKD YELTGYKLQA SSGAAMTAEL GRAYAKQQSI AVTGWVPHWM FAKWKLKFLE DPKGVYGAAE TVNSIGSKEL ATKAPEVAEF LKKFSWQSKD EIGEVMLAIQ EGAKPEAAAK DWVAKHPDRV KEWTGK
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