| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1333 |
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| Symbol | |
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| ID | 5869097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1487957 |
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| End bp | 1488817 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641546436 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001667576 |
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| Protein GI | 167032345 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.606509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTT TGAAAAAAAT GCGACGTTTC CTGGGTGTGG GCACCGCCCT GGTAATGGCC
ATGAGCGCTG CACAGGCAAT GGCTAAAGAA GTAAGCATAG GTTACGTGGA TGGTTGGGCC
GACAGCGTGG CGACCACCAA CGTGGCCGCC GAAGTGATCA AGCAAAAGCT CGGCTACGAC
GTGAAGTTGC AGGCCGTGGC CACGGGGATC ATGTGGCAGG GCGTGGCAAC CGGTAAACTC
GATGCCATGT TGTCGGCCTG GCTGCCGGTG ACCCATGGCG AGTACTGGAC CAAGAACAAG
GACAACGTGG TCGACTACGG CCCGAACTTC AAGGATGCCA AGATCGGCCT GATCGTCCCC
GAGTACGTCA AGGCGGTGAG CATCGCCGAC CTCAAGACCG ATAGCAGCTT CAAGCAGAAG
ATCGTCGGCA TTGACGCAGG CTCCGGTGTG ATGCTGAAAA CCGACCAGGC GATCAAGGAC
TACGACCTGA CCGGCTACAA GCTGCAGGCC AGCTCGGGCG CCGCGATGAC TGCGGAACTG
GGCCGTGCCT ACGCCAAGCA GCAGTCGATT GCGGTGACCG GTTGGGTTCC GCACTGGATG
TTCGCCAAGT GGAAGCTGAA GTTCCTCGAA GACCCGAAAG GTGTGTATGG CGCGGCGGAA
ACCGTGAACA GCATCGGCAG CAAGGAACTG GCGACCAAGG CTCCGGAAGT GGCGGAGTTC
CTGAAGAAGT TCAACTGGCA GTCCAAGGAC GAGATTGGCG AGGTGATGCT GGCGATTCAG
GAAGGTGCCA AGCCTGAAGC CGCGGCCAAG GATTGGGTGG CCAAGCACCC TGATCGTGTG
AAGGAGTGGA CTGGCAAGTA A
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| Protein sequence | MATLKKMRRF LGVGTALVMA MSAAQAMAKE VSIGYVDGWA DSVATTNVAA EVIKQKLGYD
VKLQAVATGI MWQGVATGKL DAMLSAWLPV THGEYWTKNK DNVVDYGPNF KDAKIGLIVP
EYVKAVSIAD LKTDSSFKQK IVGIDAGSGV MLKTDQAIKD YDLTGYKLQA SSGAAMTAEL
GRAYAKQQSI AVTGWVPHWM FAKWKLKFLE DPKGVYGAAE TVNSIGSKEL ATKAPEVAEF
LKKFNWQSKD EIGEVMLAIQ EGAKPEAAAK DWVAKHPDRV KEWTGK
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