More than 300 homologs were found in PanDaTox collection
for query gene Gbro_1077 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_1077  acyl-CoA dehydrogenase domain protein  100 
 
 
385 aa  782    Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3795  acyl-CoA dehydrogenase domain protein  43.41 
 
 
393 aa  298  8e-80  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00013086  normal  0.344818 
 
 
-
 
NC_011988  Avi_6022  acyl-CoA dehydrogenase  42.5 
 
 
399 aa  296  4e-79  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0185  acyl-CoA dehydrogenase domain-containing protein  43.73 
 
 
387 aa  296  4e-79  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4124  acyl-CoA dehydrogenase domain protein  42.31 
 
 
393 aa  287  2e-76  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.993047 
 
 
-
 
NC_009667  Oant_1476  acyl-CoA dehydrogenase protein  41.11 
 
 
390 aa  285  7e-76  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0166  putative carnitine operon oxidoreductase  41.48 
 
 
395 aa  276  5e-73  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0641  acyl-CoA dehydrogenase domain-containing protein  43.33 
 
 
407 aa  272  8.000000000000001e-72  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0818  acyl-CoA dehydrogenase domain-containing protein  43.33 
 
 
407 aa  272  8.000000000000001e-72  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0655  acyl-CoA dehydrogenase domain-containing protein  43.33 
 
 
407 aa  272  8.000000000000001e-72  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0042  acyl-CoA dehydrogenase domain-containing protein  43.06 
 
 
407 aa  271  2e-71  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2888  acyl-CoA dehydrogenase domain-containing protein  43.06 
 
 
407 aa  271  2e-71  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2510  acyl-CoA dehydrogenase domain-containing protein  43.06 
 
 
407 aa  271  2e-71  Burkholderia mallei NCTC 10247  Bacteria  normal  0.10491  n/a   
 
 
-
 
NC_007651  BTH_I0531  acyl-CoA dehydrogenase domain-containing protein  42.5 
 
 
407 aa  271  2e-71  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2197  acyl-CoA dehydrogenase domain-containing protein  43.06 
 
 
407 aa  271  2e-71  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5837  acyl-CoA dehydrogenase-like protein  42.02 
 
 
400 aa  267  2e-70  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3636  acyl-CoA dehydrogenase type 2  42.02 
 
 
398 aa  266  4e-70  Burkholderia ambifaria AMMD  Bacteria  normal  0.556701  normal 
 
 
-
 
NC_010552  BamMC406_4110  acyl-CoA dehydrogenase type 2  41.46 
 
 
398 aa  266  5.999999999999999e-70  Burkholderia ambifaria MC40-6  Bacteria  normal  0.163636  normal 
 
 
-
 
NC_007348  Reut_B5361  putative acyl-CoA dehydrogenase  41.51 
 
 
402 aa  265  1e-69  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4153  Acyl-CoA dehydrogenase, type 2-like  41.44 
 
 
398 aa  262  6.999999999999999e-69  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.240401  n/a   
 
 
-
 
NC_010515  Bcenmc03_3304  acyl-CoA dehydrogenase type 2  41.44 
 
 
398 aa  262  6.999999999999999e-69  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.890764  normal 
 
 
-
 
NC_008543  Bcen2424_4213  acyl-CoA dehydrogenase type 2  41.44 
 
 
398 aa  262  6.999999999999999e-69  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.353379 
 
 
-
 
NC_010086  Bmul_4392  acyl-CoA dehydrogenase domain-containing protein  40.88 
 
 
398 aa  258  1e-67  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1805  Acyl-CoA dehydrogenase-like  40.88 
 
 
398 aa  257  3e-67  Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_007951  Bxe_A2526  putative acyl-CoA dehydrogenase  38.9 
 
 
425 aa  248  1e-64  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0280993 
 
 
-
 
NC_010681  Bphyt_1718  acyl-CoA dehydrogenase domain protein  38.36 
 
 
428 aa  246  4e-64  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3403  acyl-CoA dehydrogenase type 2  41.46 
 
 
409 aa  242  1e-62  Methylobacterium sp. 4-46  Bacteria  normal  0.0408106  normal  0.104533 
 
 
-
 
NC_007958  RPD_1095  acyl-CoA dehydrogenase-like  40.4 
 
 
408 aa  240  4e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4597  acyl-CoA dehydrogenase domain-containing protein  41.46 
 
 
400 aa  239  5e-62  Methylobacterium extorquens PA1  Bacteria  normal  0.419077  normal  0.111113 
 
 
-
 
NC_011894  Mnod_4418  acyl-CoA dehydrogenase domain protein  41.36 
 
 
402 aa  239  8e-62  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.584473  n/a   
 
 
-
 
NC_011757  Mchl_5058  acyl-CoA dehydrogenase domain protein  41.62 
 
 
400 aa  238  2e-61  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.418777 
 
 
-
 
NC_007778  RPB_0992  Acyl-CoA dehydrogenase-like  40.29 
 
 
408 aa  229  5e-59  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.297365 
 
 
-
 
NC_011004  Rpal_5079  Acyl-CoA dehydrogenase type 2 domain  41.55 
 
 
409 aa  224  1e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3056  acyl-CoA dehydrogenase domain-containing protein  30.08 
 
 
390 aa  133  3.9999999999999996e-30  Salinispora arenicola CNS-205  Bacteria  normal  0.432663  hitchhiker  0.00291671 
 
 
-
 
NC_009380  Strop_0683  acyl-CoA dehydrogenase type 2  28.11 
 
 
385 aa  120  3e-26  Salinispora tropica CNB-440  Bacteria  normal  0.998366  normal 
 
 
-
 
NC_014150  Bmur_2643  acyl-CoA dehydrogenase domain protein  29.61 
 
 
371 aa  87.4  4e-16  Brachyspira murdochii DSM 12563  Bacteria  normal  0.475979  n/a   
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  33.51 
 
 
389 aa  79  0.0000000000001  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_013131  Caci_0550  acyl-CoA dehydrogenase domain protein  26.07 
 
 
377 aa  78.6  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.193039  decreased coverage  0.00272664 
 
 
-
 
NC_009565  TBFG_11696  acyl-CoA dehydrogenase fadE16  25.07 
 
 
373 aa  77  0.0000000000005  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.392207 
 
 
-
 
NC_007517  Gmet_3306  Acyl-CoA dehydrogenase-like  24.8 
 
 
380 aa  76.6  0.0000000000006  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  24.78 
 
 
380 aa  75.1  0.000000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2948  acyl-CoA dehydrogenase domain-containing protein  23.34 
 
 
416 aa  75.1  0.000000000002  Caulobacter sp. K31  Bacteria  normal  0.0471344  normal 
 
 
-
 
NC_009485  BBta_4293  putative Acyl-CoA dehydrogenase  24.29 
 
 
398 aa  74.3  0.000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  hitchhiker  0.004124 
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  20.9 
 
 
382 aa  69.7  0.00000000008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  23.91 
 
 
380 aa  69.3  0.0000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_2188  acyl-CoA dehydrogenase domain-containing protein  23.53 
 
 
387 aa  68.2  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.130468 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  21.57 
 
 
380 aa  68.6  0.0000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  25.37 
 
 
377 aa  68.6  0.0000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_013202  Hmuk_2157  acyl-CoA dehydrogenase domain protein  24.34 
 
 
384 aa  68.6  0.0000000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.409082  normal  0.743062 
 
 
-
 
NC_013093  Amir_6366  acyl-CoA dehydrogenase domain protein  22.62 
 
 
387 aa  66.2  0.0000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  21.68 
 
 
386 aa  65.9  0.000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_009565  TBFG_13303  acyl-CoA dehydrogenase fadE25  23.68 
 
 
389 aa  66.2  0.000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  28.18 
 
 
382 aa  64.7  0.000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4214  acyl-CoA dehydrogenase domain protein  25.82 
 
 
386 aa  63.5  0.000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  0.234142  normal  0.067843 
 
 
-
 
NC_011146  Gbem_3575  acyl-CoA dehydrogenase domain protein  22.44 
 
 
380 aa  62.4  0.00000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5885  acyl-CoA dehydrogenase domain-containing protein  26.27 
 
 
375 aa  62.4  0.00000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.468713 
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  21.53 
 
 
389 aa  61.6  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2570  acyl-CoA dehydrogenase domain-containing protein  23.3 
 
 
389 aa  62  0.00000002  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  24.43 
 
 
382 aa  61.6  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_007333  Tfu_1647  acyl-CoA dehydrogenase  22.16 
 
 
385 aa  62  0.00000002  Thermobifida fusca YX  Bacteria  normal  0.658516  n/a   
 
 
-
 
NC_013743  Htur_1150  acyl-CoA dehydrogenase domain protein  24.23 
 
 
380 aa  61.2  0.00000003  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  24.57 
 
 
381 aa  61.2  0.00000003  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  22.84 
 
 
417 aa  60.8  0.00000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009714  CHAB381_1168  putative acyl-coa dehydrogenase  24.21 
 
 
372 aa  60.1  0.00000006  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4334  acyl-CoA dehydrogenase type 2  28.04 
 
 
409 aa  60.1  0.00000007  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  27.81 
 
 
388 aa  60.1  0.00000007  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_008686  Pden_0714  butyryl-CoA dehydrogenase  27.12 
 
 
384 aa  60.1  0.00000007  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  23.88 
 
 
381 aa  59.3  0.0000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  28.93 
 
 
392 aa  59.3  0.0000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_2163  acyl-CoA dehydrogenase type 2  24.58 
 
 
395 aa  58.9  0.0000001  Pseudomonas putida GB-1  Bacteria  normal  0.893753  normal  0.219871 
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  21.88 
 
 
387 aa  59.3  0.0000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  28.95 
 
 
388 aa  59.3  0.0000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_013947  Snas_6030  acyl-CoA dehydrogenase domain-containing protein  22.54 
 
 
391 aa  59.3  0.0000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0934  acyl-CoA dehydrogenase domain-containing protein  21.23 
 
 
387 aa  59.3  0.0000001  Salinispora tropica CNB-440  Bacteria  normal  normal  0.496704 
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  23.88 
 
 
381 aa  59.3  0.0000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  26.86 
 
 
390 aa  58.5  0.0000002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  24.16 
 
 
381 aa  58.2  0.0000002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  24.16 
 
 
381 aa  58.2  0.0000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1388  acyl-CoA dehydrogenase domain-containing protein  29.45 
 
 
389 aa  58.2  0.0000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  23.88 
 
 
381 aa  58.5  0.0000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  26.12 
 
 
390 aa  58.5  0.0000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  23.98 
 
 
379 aa  58.5  0.0000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  27.74 
 
 
383 aa  58.2  0.0000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008346  Swol_1483  butyryl-CoA dehydrogenase  21.97 
 
 
382 aa  58.9  0.0000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7768  acyl-CoA dehydrogenase domain protein  22.98 
 
 
397 aa  58.2  0.0000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0762  acyl-CoA dehydrogenase domain-containing protein  26.09 
 
 
381 aa  58.2  0.0000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.927466  normal  0.783766 
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  23.88 
 
 
381 aa  57.8  0.0000003  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  24.07 
 
 
381 aa  58.2  0.0000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  23.88 
 
 
381 aa  57.8  0.0000003  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  23.88 
 
 
381 aa  57.8  0.0000003  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  23.88 
 
 
381 aa  57.8  0.0000003  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  23.15 
 
 
376 aa  58.2  0.0000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  26.4 
 
 
379 aa  57.8  0.0000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_011145  AnaeK_4249  acyl-CoA dehydrogenase domain protein  27.17 
 
 
580 aa  58.2  0.0000003  Anaeromyxobacter sp. K  Bacteria  normal  0.808927  n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  27.27 
 
 
386 aa  58.2  0.0000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3527  acyl-CoA dehydrogenase domain protein  24.5 
 
 
386 aa  58.2  0.0000003  Spirosoma linguale DSM 74  Bacteria  normal  0.496474  normal 
 
 
-
 
NC_007348  Reut_B4150  butyryl-CoA dehydrogenase  28.08 
 
 
388 aa  57.4  0.0000004  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4272  acyl-CoA dehydrogenase domain protein  27.17 
 
 
580 aa  57.4  0.0000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  24.01 
 
 
381 aa  57.4  0.0000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4115  acyl-CoA dehydrogenase domain protein  22.74 
 
 
390 aa  57.4  0.0000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
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