Gene Hmuk_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2157 
Symbol 
ID8411696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2067164 
End bp2068318 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content65% 
IMG OID645020499 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003177977 
Protein GI257388204 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.409082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.743062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCC TAGAAGAGAC AGTCGTTCCC GAAGAAGCAC GGGACATCAA ACAGGAAGCC 
CGTGAGTTCG CAGCGGAACA CATCGAACCG AACGCCCAGG AGTACTACGA GCGCGGCGAG
TACCCGGTCG ACATCCTGGA GGAGGGGATG GAAGCCGGGC TGGTCGCACA GGACATCGGC
GAGGAGTACG GCGGGCGCGG GCTCTCCCTC CAGCAGGTCC TCGCGATGGC CGAGGAGTTC
TACAAGGCCG ACGCCGGCAT CGCTCTGACC CTACAGCTCG CGAGCTTCGG CGCGGAGATG
CTCGAAGACC ACGGCAACGA GGAACAGAAA GAGGAGTACC TCCGTCCGGT CGCGGAGAAC
GAACAGCTCA CCGGCCTGGC CGTCTCGGAG CCCGAGACCG GGAGCGACAT GGCCGGGATG
CAGACGACGG CGGAGAAAGA CGGCGACGAG TACGTCCTCA ACGGCGAGAA GTACTGGATC
GGCAACGGCG TCGAAGCCGA CTGGGTCACG GTCTACGCCA AGACCGGCGA CGACCCCAAC
AACCGCTACG GCAACTACTC GCTGTTCATC GTCCCGACCG ACACCGACGG CTACGACGCC
GAGCACATCC CGGAGAAGAT GGGGTTCCGT GCGTCCAAAC AGGCCCACAT CGTCTTCGAC
GACTGCCGGG TTCCCGAGGA GAACGTCATC GGCCACGAGG GCGCTGGCTT CTACATGCTC
GCGGAGTTCT TCAACCACGG CCGCGTGATC GTCGCCGGCC ACGGCCTCGG ACTGGCCGCG
GCCGCCATCG AGGAGGCGTG GGAGTTCGTC CACGACCGCG AAGCCTTCGG CAAGTCCGTC
GACGAGTTCC AGGCGGTCCA GCACAAGCTC GCGGACATGC GCATGGAGTT CGAGTCCGCC
CGTGCACTCA CGTGGCGCGC GGCCGACAAG GTGGCCAACC AGGAGGACGC GGGATTCTGG
GCGGCCATGG CCAAGACGAA GGCGACCGAA GTGTCGACCC AGTGTGCCGA GAAGGGGATG
CAGCTCCACG GCGGCCGTTC GGTCCTGACC GAGAACCGGA TCTCTCGGGT CTACCGCGAC
GTGCGCATCC CGGTCATCTA CGAGGGCGCG AACGACATCC AGCGCAATCT CATCTACAGT
CAGACGCCCC AGTAA
 
Protein sequence
MDLLEETVVP EEARDIKQEA REFAAEHIEP NAQEYYERGE YPVDILEEGM EAGLVAQDIG 
EEYGGRGLSL QQVLAMAEEF YKADAGIALT LQLASFGAEM LEDHGNEEQK EEYLRPVAEN
EQLTGLAVSE PETGSDMAGM QTTAEKDGDE YVLNGEKYWI GNGVEADWVT VYAKTGDDPN
NRYGNYSLFI VPTDTDGYDA EHIPEKMGFR ASKQAHIVFD DCRVPEENVI GHEGAGFYML
AEFFNHGRVI VAGHGLGLAA AAIEEAWEFV HDREAFGKSV DEFQAVQHKL ADMRMEFESA
RALTWRAADK VANQEDAGFW AAMAKTKATE VSTQCAEKGM QLHGGRSVLT ENRISRVYRD
VRIPVIYEGA NDIQRNLIYS QTPQ