More than 300 homologs were found in PanDaTox collection
for query gene Cpin_3413 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_3413  acyl-CoA dehydrogenase domain protein  100 
 
 
385 aa  795    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.926635  normal  0.183052 
 
 
-
 
NC_009972  Haur_3970  acyl-CoA dehydrogenase domain-containing protein  49.07 
 
 
376 aa  379  1e-104  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.493916  n/a   
 
 
-
 
NC_013440  Hoch_2948  acyl-CoA dehydrogenase domain protein  45.78 
 
 
391 aa  342  5e-93  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0163396  normal 
 
 
-
 
NC_011898  Ccel_0988  acyl-CoA dehydrogenase domain protein  44.26 
 
 
378 aa  338  9e-92  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7011  acyl-CoA dehydrogenase domain protein  45.84 
 
 
382 aa  327  3e-88  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00655237 
 
 
-
 
NC_013440  Hoch_1175  acyl-CoA dehydrogenase domain protein  46.43 
 
 
411 aa  324  2e-87  Haliangium ochraceum DSM 14365  Bacteria  normal  0.14538  normal 
 
 
-
 
NC_006368  lpp1922  hypothetical protein  39.67 
 
 
375 aa  295  1e-78  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1911  hypothetical protein  39.39 
 
 
375 aa  291  2e-77  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_3313  acyl-CoA dehydrogenase domain-containing protein  39.95 
 
 
384 aa  289  6e-77  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1327  acyl-CoA dehydrogenase domain protein  38.25 
 
 
399 aa  258  9e-68  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  36.86 
 
 
379 aa  257  2e-67  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  38.92 
 
 
402 aa  258  2e-67  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_009972  Haur_1248  acyl-CoA dehydrogenase domain-containing protein  36.58 
 
 
415 aa  258  2e-67  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.702512  n/a   
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  40.56 
 
 
383 aa  255  9e-67  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  38.86 
 
 
379 aa  253  4.0000000000000004e-66  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  38.96 
 
 
382 aa  253  6e-66  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_012793  GWCH70_0441  acyl-CoA dehydrogenase domain protein  37.43 
 
 
401 aa  253  6e-66  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0741  acyl-CoA dehydrogenase domain protein  37.23 
 
 
417 aa  252  1e-65  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.37799  normal  0.427722 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  37.93 
 
 
379 aa  251  2e-65  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  37.67 
 
 
379 aa  249  6e-65  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3165  acyl-CoA dehydrogenase domain-containing protein  35.96 
 
 
445 aa  249  8e-65  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.256023  normal 
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  37.94 
 
 
386 aa  248  2e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_2300  acyl-CoA dehydrogenase domain-containing protein  35.98 
 
 
414 aa  247  3e-64  Roseiflexus sp. RS-1  Bacteria  normal  0.242601  normal 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  36.17 
 
 
379 aa  246  6.999999999999999e-64  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  36.81 
 
 
379 aa  245  9e-64  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  38.59 
 
 
379 aa  244  3e-63  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0656  acyl-CoA dehydrogenase domain-containing protein  36.96 
 
 
380 aa  243  3e-63  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3656  acyl-CoA dehydrogenase domain-containing protein  39.84 
 
 
377 aa  243  3.9999999999999997e-63  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4086  acyl-CoA dehydrogenase domain protein  37.91 
 
 
377 aa  242  7e-63  Ralstonia pickettii 12D  Bacteria  normal  0.303595  normal  0.349393 
 
 
-
 
NC_010678  Rpic_3973  acyl-CoA dehydrogenase domain protein  37.91 
 
 
377 aa  242  7e-63  Ralstonia pickettii 12J  Bacteria  normal  0.78306  normal  0.788161 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  39.45 
 
 
379 aa  242  1e-62  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  38.9 
 
 
379 aa  241  2e-62  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  38.9 
 
 
379 aa  240  2.9999999999999997e-62  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  38.9 
 
 
379 aa  240  4e-62  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  38.63 
 
 
379 aa  239  5e-62  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  38.74 
 
 
377 aa  239  5.999999999999999e-62  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  37.6 
 
 
380 aa  239  6.999999999999999e-62  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008391  Bamb_4385  acyl-CoA dehydrogenase domain-containing protein  39.01 
 
 
377 aa  239  6.999999999999999e-62  Burkholderia ambifaria AMMD  Bacteria  normal  0.351154  normal  0.113053 
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  39.01 
 
 
377 aa  239  8e-62  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  38.63 
 
 
379 aa  238  9e-62  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  38.19 
 
 
377 aa  238  2e-61  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1084  butyryl-CoA dehydrogenase  38.8 
 
 
377 aa  238  2e-61  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0155468 
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  37.5 
 
 
392 aa  238  2e-61  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  38.46 
 
 
377 aa  238  2e-61  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5650  acyl-CoA dehydrogenase domain protein  38.25 
 
 
377 aa  237  2e-61  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  38.46 
 
 
377 aa  238  2e-61  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  38.46 
 
 
379 aa  237  3e-61  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  38.36 
 
 
379 aa  237  3e-61  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  38.36 
 
 
379 aa  237  3e-61  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  38.36 
 
 
379 aa  237  3e-61  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  38.36 
 
 
379 aa  236  7e-61  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_06620  butyryl-CoA dehydrogenase  37.91 
 
 
380 aa  235  1.0000000000000001e-60  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1850  acyl-CoA dehydrogenase domain protein  38.32 
 
 
397 aa  235  1.0000000000000001e-60  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.100236  n/a   
 
 
-
 
NC_007953  Bxe_C0247  Acyl-CoA dehydrogenase  37.64 
 
 
378 aa  235  1.0000000000000001e-60  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2482  butyryl-CoA dehydrogenase  36.89 
 
 
395 aa  234  2.0000000000000002e-60  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3451  acyl-CoA dehydrogenase domain protein  39.13 
 
 
377 aa  234  3e-60  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007348  Reut_B4257  butyryl-CoA dehydrogenase  38.46 
 
 
377 aa  233  3e-60  Ralstonia eutropha JMP134  Bacteria  normal  0.725306  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  36.99 
 
 
376 aa  232  8.000000000000001e-60  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0455  acyl-CoA dehydrogenase domain-containing protein  36.26 
 
 
380 aa  231  1e-59  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  35.62 
 
 
380 aa  231  2e-59  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3827  bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)  37.98 
 
 
379 aa  231  2e-59  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  35.52 
 
 
381 aa  231  2e-59  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS05570  acyl-CoA dehydrogenase oxidoreductase protein  38.46 
 
 
377 aa  229  5e-59  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.213032 
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  37.09 
 
 
394 aa  229  6e-59  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_010322  PputGB1_2436  acyl-CoA dehydrogenase domain-containing protein  36.54 
 
 
383 aa  228  1e-58  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  35.89 
 
 
386 aa  228  1e-58  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_010623  Bphy_5126  acyl-CoA dehydrogenase domain-containing protein  36.34 
 
 
377 aa  228  1e-58  Burkholderia phymatum STM815  Bacteria  normal  normal  0.393324 
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  36.21 
 
 
386 aa  227  2e-58  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  36.16 
 
 
379 aa  228  2e-58  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  36.16 
 
 
379 aa  228  2e-58  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  37.26 
 
 
376 aa  227  2e-58  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0362  acyl-CoA dehydrogenase domain protein  35.28 
 
 
406 aa  228  2e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013061  Phep_0136  acyl-CoA dehydrogenase domain protein  38.08 
 
 
379 aa  228  2e-58  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3492  acyl-CoA dehydrogenase domain-containing protein  36.26 
 
 
383 aa  227  3e-58  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_1150  acyl-CoA dehydrogenase domain protein  37.3 
 
 
380 aa  227  3e-58  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  37.09 
 
 
380 aa  227  3e-58  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_3822  acyl-CoA dehydrogenase domain protein  36.96 
 
 
379 aa  226  5.0000000000000005e-58  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.962066  normal  0.565208 
 
 
-
 
NC_009512  Pput_2279  acyl-CoA dehydrogenase domain-containing protein  36.26 
 
 
383 aa  226  7e-58  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  36.99 
 
 
381 aa  226  7e-58  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  36.71 
 
 
376 aa  225  8e-58  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  36.71 
 
 
376 aa  225  8e-58  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  36.36 
 
 
379 aa  225  1e-57  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_010501  PputW619_2885  acyl-CoA dehydrogenase domain-containing protein  36.54 
 
 
383 aa  225  1e-57  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3574  putative acyl-CoA dehydrogenase  37.64 
 
 
377 aa  225  1e-57  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  37.26 
 
 
381 aa  224  1e-57  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  35.99 
 
 
380 aa  225  1e-57  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  33.61 
 
 
379 aa  224  2e-57  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_013730  Slin_5641  Butyryl-CoA dehydrogenase  35.79 
 
 
379 aa  224  2e-57  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6770  acyl-CoA dehydrogenase domain protein  34.4 
 
 
390 aa  224  2e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.210456  normal  0.358603 
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.71 
 
 
376 aa  224  2e-57  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  36.71 
 
 
376 aa  224  2e-57  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_009972  Haur_4610  acyl-CoA dehydrogenase domain-containing protein  37.26 
 
 
379 aa  224  2e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000229425  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  36.71 
 
 
376 aa  223  3e-57  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.71 
 
 
376 aa  224  3e-57  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  36.71 
 
 
381 aa  224  3e-57  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1570  acyl-CoA dehydrogenase domain protein  35.15 
 
 
383 aa  223  4e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  33.52 
 
 
388 aa  223  6e-57  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_009379  Pnuc_1555  acyl-CoA dehydrogenase domain-containing protein  36.11 
 
 
383 aa  223  6e-57  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2353  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  37.5 
 
 
378 aa  221  9.999999999999999e-57  Dechloromonas aromatica RCB  Bacteria  normal  0.663187  normal  0.71414 
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  34.52 
 
 
379 aa  221  1.9999999999999999e-56  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
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