| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0988 |
|---|
| Symbol | |
|---|
| ID | 7309818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1216164 |
|---|
| End bp | 1217300 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643607915 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_002505330 |
|---|
| Protein GI | 220928421 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATAG AATTAACGCC TGAACAGCTT AAGTATCAGG AAGAAGTCAA GACATTCGTA
GATACTGTAA TAAAACCGAT GGCACAACAA AATGATAGAG AAGAACAGAT GCCCGCAGAA
CTCATTAAAA AGATTGGGGA GAATGGACAC TTAGGCTCTG TTATCGCTAA AGAATACGGT
GGACAGGAAC TTGATATGAT ATCCATTGGA CTATTGAATG AAGAGTTCGG TCGTGGATGC
TCTTCTGCTA GGAGCTTACT TACAGTTCAT GGGATGGTAG CTCTTGCGAT TGATAGGTGG
GGTACTCAAG AACAGAGAAA TTACTGGCTG CCTAGAATGT CTAAGGGGCA TATAATAGGG
GCATTTGGCT TAACTGAACC AAATGTAGGC TCTGATGCTA AAAGCATAGA GACTACAGCA
GTTCTAAACG GAGATTGCTA TGTACTGAAT GGGAAAAAAA AGTGGATTAC TATGGGGCAA
GTTGCAGATG TTTTCCTAAT TTTTGCTCGG TGTGAGGATA AGCCTACAGC ATTTCTTGTT
AACAGAGATA CTTCTGGCTT TTCAACTAAG CCTATAAAGG GTTTAATGGG TGCAAGGGCC
TCTATGGTTG CAGAGTTGAT AATGGAAGAC TGTCATATTC CTAAAGAGAA TATAGTAGGG
AGAGTTGGTA CGGGACTATC ACATGTTGGA CTAAACAGTC TTGATTATGG CAGGTATACT
ATAGCATGGG GATGCGTCGG ATTGGGAGAA GCATGTCTTG AAGAGAGCGT GCGTTATTCA
AGAAAAAGAA AGCAGTTTGG ACAGCCATTA AGACAAAACC AGCTAATACA GAAGATGGTA
ACAGAAATGT CAGTGAATAT TAAAGCTGCG AGGCTTCTAT GCCTCAATGC TGGCTATCTA
AAGGATATTG GAGATCCTGA CACAATAATG GAAACATGGA ATGCAAAATA CTTTGCAGCA
AAAATGGTAG TTAAGGTGGC AAGTGATGCA GTACAGATTC ATGGAGCTAA AGGGTGTTGC
AATGAATATC CCGTAGAAAG ATACTATAGG GATTCCAAAA TTAATGAAAT AATAGAAGGA
ACAACTCAGA TGCATGAGCT GCTGATTGCT ACAAATGTAT TTAGAAATAT CAGATAA
|
|---|
| Protein sequence | MIIELTPEQL KYQEEVKTFV DTVIKPMAQQ NDREEQMPAE LIKKIGENGH LGSVIAKEYG
GQELDMISIG LLNEEFGRGC SSARSLLTVH GMVALAIDRW GTQEQRNYWL PRMSKGHIIG
AFGLTEPNVG SDAKSIETTA VLNGDCYVLN GKKKWITMGQ VADVFLIFAR CEDKPTAFLV
NRDTSGFSTK PIKGLMGARA SMVAELIMED CHIPKENIVG RVGTGLSHVG LNSLDYGRYT
IAWGCVGLGE ACLEESVRYS RKRKQFGQPL RQNQLIQKMV TEMSVNIKAA RLLCLNAGYL
KDIGDPDTIM ETWNAKYFAA KMVVKVASDA VQIHGAKGCC NEYPVERYYR DSKINEIIEG
TTQMHELLIA TNVFRNIR
|
|---|
| |