33 homologs were found in PanDaTox collection
for query gene BBta_2807 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_2807  LysR family transcriptional regulator  100 
 
 		 156 aa  326  6e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2862  LysR family transcriptional regulator  50 
 
 		 337 aa  160  7e-39  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.486548  normal  0.303409 
 
 
-
 
NC_010725  Mpop_0232  transcriptional regulator, LysR family  42.18 
 
 		 346 aa  137  7.999999999999999e-32  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.698548 
 
 
-
 
NC_009485  BBta_3855  LysR family transcriptional regulator  36.84 
 
 		 347 aa  94.7  4e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0669759  normal  1 
 
 
-
 
NC_008347  Mmar10_2934  LysR family transcriptional regulator  25.87 
 
 		 329 aa  68.6  0.00000000003  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010087  Bmul_6102  LysR family transcriptional regulator  27.4 
 
 		 324 aa  45.8  0.0002  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_1039  transcriptional regulator, LysR family  33.33 
 
 		 311 aa  45.1  0.0003  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1036  transcriptional regulator, LysR family  33.33 
 
 		 294 aa  45.1  0.0003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011368  Rleg2_5011  transcriptional regulator, LysR family  24 
 
 		 306 aa  45.1  0.0004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_0977  LysR family transcriptional regulator  32.86 
 
 		 311 aa  45.1  0.0004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.465087  n/a   
 
 
-
 
NC_007778  RPB_0937  LysR family transcriptional regulator  33.82 
 
 		 332 aa  44.7  0.0005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0239089  normal  1 
 
 
-
 
NC_009511  Swit_0653  LysR family transcriptional regulator  27.88 
 
 		 325 aa  44.7  0.0005  Sphingomonas wittichii RW1  Bacteria  normal  0.154415  normal  1 
 
 
-
 
NC_011757  Mchl_1222  transcriptional regulator, LysR family  29.57 
 
 		 296 aa  44.7  0.0005  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3681  LysR family transcriptional regulator  28.57 
 
 		 290 aa  44.7  0.0005  Marinomonas sp. MWYL1  Bacteria  normal  0.0791735  normal  0.203208 
 
 
-
 
NC_010172  Mext_1093  LysR substrate-binding  29.57 
 
 		 296 aa  44.7  0.0005  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_0372  transcriptional regulator, LysR family  32.05 
 
 		 313 aa  43.9  0.0008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.103497  n/a   
 
 
-
 
NC_010505  Mrad2831_0562  LysR family transcriptional regulator  30.43 
 
 		 296 aa  43.9  0.0008  Methylobacterium radiotolerans JCM 2831  Bacteria  decreased coverage  0.00274587  normal  0.0132067 
 
 
-
 
NC_007794  Saro_0854  LysR family transcriptional regulator  33.33 
 
 		 316 aa  43.1  0.001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.283464  n/a   
 
 
-
 
NC_010623  Bphy_4928  LysR family transcriptional regulator  28.32 
 
 		 307 aa  43.1  0.001  Burkholderia phymatum STM815  Bacteria  normal  0.595965  normal  1 
 
 
-
 
NC_011145  AnaeK_0359  transcriptional regulator, LysR family  30.77 
 
 		 313 aa  42.4  0.002  Anaeromyxobacter sp. K  Bacteria  normal  0.0121795  n/a   
 
 
-
 
NC_009832  Spro_3728  LysR family transcriptional regulator  28.24 
 
 		 297 aa  42.4  0.002  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011366  Rleg2_5824  transcriptional regulator, LysR family  25.95 
 
 		 317 aa  42.4  0.002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.343425 
 
 
-
 
NC_011894  Mnod_5828  transcriptional regulator, LysR family  29.91 
 
 		 296 aa  43.1  0.002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0193109  n/a   
 
 
-
 
NC_007651  BTH_I1517  LysR family transcriptional regulator  30.56 
 
 		 332 aa  42  0.003  Burkholderia thailandensis E264  Bacteria  decreased coverage  0.0000000321062  n/a   
 
 
-
 
NC_010725  Mpop_1027  transcriptional regulator, LysR family  29.57 
 
 		 296 aa  42.4  0.003  Methylobacterium populi BJ001  Bacteria  normal  0.781525  normal  1 
 
 
-
 
NC_008048  Sala_3048  LysR family transcriptional regulator  30 
 
 		 310 aa  41.6  0.004  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.104991 
 
 
-
 
NC_007760  Adeh_0343  LysR family transcriptional regulator  30.77 
 
 		 313 aa  41.6  0.004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.294854  n/a   
 
 
-
 
NC_011004  Rpal_3868  transcriptional regulator, LysR family  29.41 
 
 		 315 aa  41.2  0.005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1089  LysR family transcriptional regulator  32.26 
 
 		 300 aa  41.2  0.005  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_012858  Rleg_6740  transcriptional regulator, LysR family  26.27 
 
 		 317 aa  40.8  0.007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.217872  normal  1 
 
 
-
 
NC_009636  Smed_0323  LysR family transcriptional regulator  28.81 
 
 		 293 aa  40.8  0.008  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.23256 
 
 
-
 
NC_009667  Oant_1067  LysR family transcriptional regulator  30.89 
 
 		 293 aa  40.4  0.009  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_2895  LysR family transcriptional regulator  26.58 
 
 		 313 aa  40.4  0.01  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.521914  normal  0.0431936 
 
 
-
 
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