| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5824 |
|---|
| Symbol | |
|---|
| ID | 6977213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | + |
|---|
| Start bp | 235245 |
|---|
| End bp | 236198 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643393279 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002278097 |
|---|
| Protein GI | 209546207 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.343425 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATC CGCCGCAGTT TACTTGGGAC GATCTTCAGT TTTTTCTAGC CGTCGCCCGC
ACTGGACAGC TGTCGACGGC GGCCCGCCAG CTGCGCTCCA GCCATGCAAC CGTCTCGCGC
CGCATCGACC GGCTGGAATT CACCCTCAAG GTCAAGCTCT TCGAGCGCAA TCCGCGCGGC
TACGTGCTGA CCGCCATGGG GACGCGCTTC GTCGAGACGG CCGAGCGGAT GGAGCAGGAA
ACCGAGCGGC TGCGCGCCGA TCTCGCCGAC GGTTCGATGG CGCAGCGCGG CCTGGTGCGG
CTGAGCGCAC CGGAAGGTTT TGCCAATTTC TTCTTCGCCA CCGTGCTGCC GCGGTTTGCC
GCCCAGCATC CGCATCTCTC GCTCGAGCTG GTGACGATCC AGCAGATCAT GTCGCTGTCG
CGCAAGGAGG CCGATCTTTC CGTCGTGCTC GACGAGCCGA AGGGCGGACC CTATTTCGCC
GAGAGGCTCA CCGACTACCA TCTGCAGATC TACGGCTCAC GCGACTATCT GGCGAAGGCG
CCTGTCATCA CCTGCCGCGA TGATCTGCTC GAGCACCCCT TCGTCAGCTA TATCGAGGAA
ATGATTTTCG CGCCGGGCCT CGATTATCTC AGCGACGTGC ATCCGCGCAT CAAACCGCAG
TTCCAGAGCT CCAGCATCTT CGCCCAGCTG ACCGCCACCC GAAACGGCCT CGGCCTCTGC
ATCCTGCCCT ACTTTTTCGC CAGCCGTTAT CCCGAGCTCG TGAGGGTGCT GCCCGCGGAA
ATCGACCTCA AGCGCCACTA CTGGATCACC TGCCACCGCG ACCTGAAACA GGCGCCGCGG
GTGCGCGCCG TCATCGACTT CCTGCGTGAG GCCGTGCGCG GCGAGGACGC CCGCTTCGTG
CCGCCCTATG TCACGCCAGC CGGCCCGGCA CGCCGGGCGG AGGCTGATAT CTAA
|
|---|
| Protein sequence | MNNPPQFTWD DLQFFLAVAR TGQLSTAARQ LRSSHATVSR RIDRLEFTLK VKLFERNPRG
YVLTAMGTRF VETAERMEQE TERLRADLAD GSMAQRGLVR LSAPEGFANF FFATVLPRFA
AQHPHLSLEL VTIQQIMSLS RKEADLSVVL DEPKGGPYFA ERLTDYHLQI YGSRDYLAKA
PVITCRDDLL EHPFVSYIEE MIFAPGLDYL SDVHPRIKPQ FQSSSIFAQL TATRNGLGLC
ILPYFFASRY PELVRVLPAE IDLKRHYWIT CHRDLKQAPR VRAVIDFLRE AVRGEDARFV
PPYVTPAGPA RRAEADI
|
|---|
| |