| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0653 |
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| Symbol | |
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| ID | 5197526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 708278 |
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| End bp | 709255 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580197 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001261159 |
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| Protein GI | 148553577 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.154415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCA AGGCTGCAAT AATGCAGGCG ATGCACTGGG ACGACCTACA ATTTTTCCTG
TCGCTGGCGC GGACCGGCCT GCTGACCATC GCGGCGCGAC AGCTCGACGT CGATGCGACG
ACGGTGGGCC GGCGCATCCG CCGGCTCGAA CGCAGCCTGG GCGGACAGAC ATTGTTCGTG
CAGGGCCGCG ACGGCCATGT CCTGACCGAG GCGGGCCGCC GCCTGCTCGC CCGCGTCGAG
ACGATCGAGC GCGAGGCCGA CGCGATCGCC GGCGGCGGCG ACCAGGCCGA CGGCGAGGAC
GTGCGCGGCC ATTTGCGGGT CAGCGCCTCG GAGGGGTTCG GCACCTGGAT GGTGGCGCAT
CATCTGGGCG AGTTCGCCGG CGCCCATCCG CACCTTTCGA TCGACCTCGC CGCGAACAGC
GGCTTCCTCG ATCCGTCGCG GCGCGAGGCC GACGTCGCGA TCCTGCTCGC CCGCCCCCAG
CGCGGGCCGC TGATCACCAA GAAGCTGTCC GACTACCGGC TGTGCCTCTA TGCGGCCCGC
GCCTATCTCG ACCGGCACCC GCCGATCGCG GCGCGCAGCG ACCTGCCCGC GCACCGGATG
ATCGGCTATG TCCCCGACCT GCTCTATTCG CCCGAGCTCA ACTATCTCGA CGAGCTCGGC
CCGGCGGTCG AGGCACGGCT GCGCTCCTCG TCGATCAACG CGCAATATCG GATGGTCGCG
GCGGGATCGG GGATCGGGGT CTTGCCCTGC TTCATCGGCG ACCGGGACGG TGCGCTCGTC
CGGGTGCTGC CCGAGGTCGC GATCACGCGC TCCTTCTGGC TCGTGACCCA TCAGGACAGC
CGCCACCTGC CCCGCACCGC GCTGTTCGTC GAATGGCTGT CGACCCTGAT GCTGCGGCAG
CGGAGCCGCC TGCTCGGCGA ATCCGACGGA ATCGTGGCGA CCGCCACCCT TTCATCGCTT
CTTCAGGGTC AGGCATAA
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| Protein sequence | MQPKAAIMQA MHWDDLQFFL SLARTGLLTI AARQLDVDAT TVGRRIRRLE RSLGGQTLFV
QGRDGHVLTE AGRRLLARVE TIEREADAIA GGGDQADGED VRGHLRVSAS EGFGTWMVAH
HLGEFAGAHP HLSIDLAANS GFLDPSRREA DVAILLARPQ RGPLITKKLS DYRLCLYAAR
AYLDRHPPIA ARSDLPAHRM IGYVPDLLYS PELNYLDELG PAVEARLRSS SINAQYRMVA
AGSGIGVLPC FIGDRDGALV RVLPEVAITR SFWLVTHQDS RHLPRTALFV EWLSTLMLRQ
RSRLLGESDG IVATATLSSL LQGQA
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