| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3868 |
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| Symbol | |
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| ID | 6411548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4156261 |
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| End bp | 4157208 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713750 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001992841 |
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| Protein GI | 192292236 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAAGA CTCAGCGCAC CATCAGGTAC GACTGGAACG ACGTCGTCTA TTTCCTCGAA
GTGGCGCGGC AGCGCAGTCT GGTCCGCGCC GCCGCCAAGC TGAAGGTCGA CCACACCACC
GTCAGCCGAC GCGTCCGCGA GCTGGAGCGC AGCCTCAACT CGACGCTATT CAAGCGCAGC
AAGTCGGGCT TCACGCTGAC CGAGATCGGC ATGCGGTTGC TGCAATATGC CGAGGGCATG
GAAAGCCAGG CCAACTCGAT CGTCGAGGCG ATCGGGACCG ATACCGCCGA TGCCGGCGGC
GCGGTGCGGA TCGCCGCGAT GGAGGGGATC GGCAGCTTTT ATCTCACGCG CTGCATCGCC
GACTTCAACC GGATCTACCC GTCGATCCAG ATCGAACTGA TCACCGACAC GCGGCTGCTC
GACCTCAGCC GGCGCGAGGC GGATATCTTC GTCAGCTTCT TCCGGCCGCA CGGCAAAAGA
CTGTCGATCA AGAAGGTCGG CGAATTCCGG ATCTCGCTGT ACGCGACGGA CGCTTATTTC
GGAGGACGAA GCCCGCCGAC GACGGTGAAG GAGCTGGAGA CCCACGCCTT CATCGATTTC
ATCGAGGACT ACATCTACAG CAAGGAGAAC CGCTGGCTGT CGGACGTGTT GCGGCCGCCG
CATACGATCT TCCGCAGCAC CAGCCTGGTG GCGCAGTCGA TCGCCGTCTC GGCCGGCCAA
GGGATCGCGA TGCTGCCGTC CTACGTGGCG TCCGGCAATG CCGAGCTATT TCCGGTGATG
CCCGAGCTGT TCACCACGCG CGACATCTGG CTGTCGGTCC ACGAAGACCT GCTTCACGTC
GCGCGGATCA AGGCGGTCAC GACGTTTTTG GAAAAGCGGA TCGAGGCCGA CAAGGCGTTC
CTGAACTCGG TGCAGAATCA GCGCGGTCGC CGCAAGCGGA ATGGCTGA
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| Protein sequence | MAKTQRTIRY DWNDVVYFLE VARQRSLVRA AAKLKVDHTT VSRRVRELER SLNSTLFKRS
KSGFTLTEIG MRLLQYAEGM ESQANSIVEA IGTDTADAGG AVRIAAMEGI GSFYLTRCIA
DFNRIYPSIQ IELITDTRLL DLSRREADIF VSFFRPHGKR LSIKKVGEFR ISLYATDAYF
GGRSPPTTVK ELETHAFIDF IEDYIYSKEN RWLSDVLRPP HTIFRSTSLV AQSIAVSAGQ
GIAMLPSYVA SGNAELFPVM PELFTTRDIW LSVHEDLLHV ARIKAVTTFL EKRIEADKAF
LNSVQNQRGR RKRNG
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