11 homologs were found in PanDaTox collection
for query gene Xaut_1214 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_1214  putative signal peptide protein  100 
 
 
138 aa  272  1.0000000000000001e-72  Xanthobacter autotrophicus Py2  Bacteria  normal  0.368519  normal 
 
 
-
 
NC_008254  Meso_1578  putative signal peptide protein  35.77 
 
 
134 aa  84  6e-16  Chelativorans sp. BNC1  Bacteria  normal  0.212746  n/a   
 
 
-
 
NC_007948  Bpro_0098  hypothetical protein  40.54 
 
 
267 aa  83.2  0.000000000000001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2316  hypothetical protein  38.26 
 
 
122 aa  73.9  0.0000000000007  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1991  hypothetical protein  38.79 
 
 
129 aa  70.5  0.000000000008  Nitrobacter hamburgensis X14  Bacteria  normal  0.505887  n/a   
 
 
-
 
NC_007964  Nham_1968  hypothetical protein  39.13 
 
 
122 aa  70.1  0.000000000009  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1842  putative signal peptide protein  31.25 
 
 
150 aa  64.3  0.0000000005  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.171125 
 
 
-
 
NC_013411  GYMC61_3459  hypothetical protein  29.73 
 
 
125 aa  61.2  0.000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_0187  TonB-dependent receptor  34.82 
 
 
128 aa  54.3  0.0000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1353  TonB-dependent receptor  33.33 
 
 
125 aa  50.8  0.000005  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4778  putative signal peptide protein  30.95 
 
 
137 aa  50.1  0.00001  Caulobacter sp. K31  Bacteria  normal  0.221864  normal  0.829882 
 
 
-
 
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