10 homologs were found in PanDaTox collection
for query gene Nham_1991 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_1991  hypothetical protein  100 
 
 
129 aa  246  1e-64  Nitrobacter hamburgensis X14  Bacteria  normal  0.505887  n/a   
 
 
-
 
NC_007964  Nham_1968  hypothetical protein  99.18 
 
 
122 aa  229  7.000000000000001e-60  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2316  hypothetical protein  89.34 
 
 
122 aa  209  7.999999999999999e-54  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1214  putative signal peptide protein  38.79 
 
 
138 aa  70.5  0.000000000008  Xanthobacter autotrophicus Py2  Bacteria  normal  0.368519  normal 
 
 
-
 
NC_013411  GYMC61_3459  hypothetical protein  31.71 
 
 
125 aa  70.1  0.00000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_0098  hypothetical protein  32.48 
 
 
267 aa  68.2  0.00000000004  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1578  putative signal peptide protein  29.92 
 
 
134 aa  61.2  0.000000005  Chelativorans sp. BNC1  Bacteria  normal  0.212746  n/a   
 
 
-
 
NC_009636  Smed_1842  putative signal peptide protein  32.82 
 
 
150 aa  42  0.003  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.171125 
 
 
-
 
NC_008347  Mmar10_1766  hypothetical protein  30.77 
 
 
124 aa  41.6  0.004  Maricaulis maris MCS10  Bacteria  normal  0.783471  normal  0.252748 
 
 
-
 
NC_007912  Sde_1353  TonB-dependent receptor  28.18 
 
 
125 aa  40.8  0.006  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>