10 homologs were found in PanDaTox collection
for query gene Nham_1968 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_1968  hypothetical protein  100 
 
 
122 aa  231  2.0000000000000002e-60  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1991  hypothetical protein  99.18 
 
 
129 aa  229  7.000000000000001e-60  Nitrobacter hamburgensis X14  Bacteria  normal  0.505887  n/a   
 
 
-
 
NC_007964  Nham_2316  hypothetical protein  88.52 
 
 
122 aa  208  2e-53  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1214  putative signal peptide protein  39.13 
 
 
138 aa  70.1  0.000000000009  Xanthobacter autotrophicus Py2  Bacteria  normal  0.368519  normal 
 
 
-
 
NC_013411  GYMC61_3459  hypothetical protein  32.23 
 
 
125 aa  69.3  0.00000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_0098  hypothetical protein  32.48 
 
 
267 aa  67.4  0.00000000006  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1578  putative signal peptide protein  30.58 
 
 
134 aa  58.9  0.00000002  Chelativorans sp. BNC1  Bacteria  normal  0.212746  n/a   
 
 
-
 
NC_008347  Mmar10_1766  hypothetical protein  30.51 
 
 
124 aa  42  0.003  Maricaulis maris MCS10  Bacteria  normal  0.783471  normal  0.252748 
 
 
-
 
NC_009636  Smed_1842  putative signal peptide protein  31.97 
 
 
150 aa  40.4  0.007  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.171125 
 
 
-
 
NC_007912  Sde_1353  TonB-dependent receptor  31 
 
 
125 aa  40  0.01  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
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