| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1842 |
|---|
| Symbol | |
|---|
| ID | 5322700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1919514 |
|---|
| End bp | 1919966 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640790780 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_001327512 |
|---|
| Protein GI | 150397045 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.171125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAGA ACATGCTAAT TTTCTTGTTT TTATCGGAGG GGAGCCCGAT GCCACGTATT
GCAAACCTTT ATTTCAAAAC AGCGATTGTC TTTTTGATCC TTGGCATTTC GATCGGCCTG
CATATGTCGA TCTCAGGAAA CCATGCCGCG ACGGGCGCTC ATGCTCACGC CAACCTGCTG
GGCTGGGTCA CGATGGCGAT TTTCGGCGGC TATCATGCGC TCAACCCCCA AAAGGCGGCG
AGGCGGCTGG CGATGATACA ATACGCCGTC TACACCTTCG GGGTCGCGGT CCTCATTCCG
TCTCTATACC TGCTGCTATC AGGCAATACT GCGGTGGAGC CGATCGTCGC CGTCTCTTCG
CTCATTGCCT TTGCCGGCGT TCTGCTCTTT GCCGTCATCA TCTTCTCGAG CAGCGAAGCG
CCTGTTTCGG CAAGGGTGGC GCCGACCCAT TGA
|
|---|
| Protein sequence | MRENMLIFLF LSEGSPMPRI ANLYFKTAIV FLILGISIGL HMSISGNHAA TGAHAHANLL
GWVTMAIFGG YHALNPQKAA RRLAMIQYAV YTFGVAVLIP SLYLLLSGNT AVEPIVAVSS
LIAFAGVLLF AVIIFSSSEA PVSARVAPTH
|
|---|
| |