Gene Sde_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1353 
Symbol 
ID3965302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1749290 
End bp1749667 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content46% 
IMG OID637920429 
ProductTonB-dependent receptor 
Protein accessionYP_526827 
Protein GI90021000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA AATATGTTTT AACGGGGTTG GGGTATGCCA TTATCGGGCT AGTGCTAGGT 
ATATATATGG CTGCCACCCA TAATCACGGC CAGTTAGTTA CCCATGCGCA TATTATGTTG
CTTGGGTTTG TAGTGAGTTT TATTTATGGG GTTTGTCATA GACTATGGCT TGTAAGCCCA
TCTCGTGCTT TGGTTCGCGC CCAGTTTTAT CTCCATCAGG TGGGCACCTT GGCGCTATTG
GTGGGGTTGT TCGTTATGTA CAGTGGTGTC ATCGCAGCGT GGATACAACC GCTACTGGCT
GTGTCTTCCC TGTGCGTGTT AGCGGCTATG GTGTTGATGA AAGTACTGTT TATACAGGCT
TCTAAGAATA CCAATTAA
 
Protein sequence
MDKKYVLTGL GYAIIGLVLG IYMAATHNHG QLVTHAHIML LGFVVSFIYG VCHRLWLVSP 
SRALVRAQFY LHQVGTLALL VGLFVMYSGV IAAWIQPLLA VSSLCVLAAM VLMKVLFIQA
SKNTN