10 homologs were found in PanDaTox collection
for query gene Nham_2316 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_2316  hypothetical protein  100 
 
 
122 aa  231  2.0000000000000002e-60  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1991  hypothetical protein  89.34 
 
 
129 aa  209  7.999999999999999e-54  Nitrobacter hamburgensis X14  Bacteria  normal  0.505887  n/a   
 
 
-
 
NC_007964  Nham_1968  hypothetical protein  88.52 
 
 
122 aa  208  2e-53  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1214  putative signal peptide protein  38.26 
 
 
138 aa  73.9  0.0000000000007  Xanthobacter autotrophicus Py2  Bacteria  normal  0.368519  normal 
 
 
-
 
NC_007948  Bpro_0098  hypothetical protein  33.33 
 
 
267 aa  70.1  0.000000000008  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3459  hypothetical protein  32.79 
 
 
125 aa  70.5  0.000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_1578  putative signal peptide protein  28.93 
 
 
134 aa  57.4  0.00000006  Chelativorans sp. BNC1  Bacteria  normal  0.212746  n/a   
 
 
-
 
NC_010338  Caul_4778  putative signal peptide protein  32.71 
 
 
137 aa  43.9  0.0007  Caulobacter sp. K31  Bacteria  normal  0.221864  normal  0.829882 
 
 
-
 
NC_009636  Smed_1842  putative signal peptide protein  33.61 
 
 
150 aa  41.6  0.004  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.171125 
 
 
-
 
NC_007912  Sde_1353  TonB-dependent receptor  28.85 
 
 
125 aa  40.4  0.008  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
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