9 homologs were found in PanDaTox collection
for query gene Tgr7_0187 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_0187  TonB-dependent receptor  100 
 
 
128 aa  250  5.000000000000001e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2991  TonB-dependent receptor  53.85 
 
 
125 aa  118  3e-26  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_1353  TonB-dependent receptor  44.35 
 
 
125 aa  113  6.9999999999999995e-25  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0938  TonB-dependent receptor  51.18 
 
 
129 aa  113  7.999999999999999e-25  Shewanella loihica PV-4  Bacteria  normal  0.278087  normal 
 
 
-
 
NC_008347  Mmar10_1766  hypothetical protein  33.06 
 
 
124 aa  64.3  0.0000000006  Maricaulis maris MCS10  Bacteria  normal  0.783471  normal  0.252748 
 
 
-
 
NC_013411  GYMC61_3459  hypothetical protein  31.86 
 
 
125 aa  55.1  0.0000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009720  Xaut_1214  putative signal peptide protein  34.82 
 
 
138 aa  54.3  0.0000006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.368519  normal 
 
 
-
 
NC_008254  Meso_1578  putative signal peptide protein  28.57 
 
 
134 aa  49.3  0.00002  Chelativorans sp. BNC1  Bacteria  normal  0.212746  n/a   
 
 
-
 
NC_007948  Bpro_0098  hypothetical protein  30.1 
 
 
267 aa  45.1  0.0003  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
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