8 homologs were found in PanDaTox collection
for query gene Shew_0938 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_0938  TonB-dependent receptor  100 
 
 		 129 aa  253  5e-67  Shewanella loihica PV-4  Bacteria  normal  0.278087  normal  1 
 
 
-
 
NC_007912  Sde_1353  TonB-dependent receptor  48.82 
 
 		 125 aa  130  5e-30  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_0187  TonB-dependent receptor  51.18 
 
 		 128 aa  129  2.0000000000000002e-29  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_2991  TonB-dependent receptor  51.18 
 
 		 125 aa  126  1.0000000000000001e-28  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008347  Mmar10_1766  hypothetical protein  31.75 
 
 		 124 aa  60.8  0.000000007  Maricaulis maris MCS10  Bacteria  normal  0.783471  normal  0.252748 
 
 
-
 
NC_007948  Bpro_0098  hypothetical protein  32.26 
 
 		 267 aa  55.5  0.0000002  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_1578  putative signal peptide protein  31.9 
 
 		 134 aa  53.1  0.000001  Chelativorans sp. BNC1  Bacteria  normal  0.212746  n/a   
 
 
-
 
NC_013411  GYMC61_3459  hypothetical protein  28.8 
 
 		 125 aa  45.4  0.0003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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