9 homologs were found in PanDaTox collection
for query gene Vapar_2454 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_2454  hypothetical protein  100 
 
 		 238 aa  491  9.999999999999999e-139  Variovorax paradoxus S110  Bacteria  hitchhiker  0.000820682  n/a   
 
 
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NC_010002  Daci_4559  DNA ligase III-like protein  29.76 
 
 		 284 aa  55.1  0.0000009  Delftia acidovorans SPH-1  Bacteria  normal  0.128562  normal  1 
 
 
-
 
NC_013440  Hoch_1600  hypothetical protein  29.46 
 
 		 274 aa  50.1  0.00003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.311006  normal  1 
 
 
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NC_008782  Ajs_0826  DNA ligase III-like protein  30.18 
 
 		 235 aa  48.9  0.00006  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.771105 
 
 
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NC_012917  PC1_2133  hypothetical protein  30.25 
 
 		 294 aa  48.1  0.0001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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NC_013421  Pecwa_2475  hypothetical protein  29.41 
 
 		 307 aa  46.6  0.0003  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_013131  Caci_7067  kinase-like protein  28.91 
 
 		 577 aa  44.3  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106105  normal  0.962511 
 
 
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NC_014210  Ndas_2599  hypothetical protein  26.95 
 
 		 261 aa  43.9  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.000426908  normal  0.0209835 
 
 
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NC_007510  Bcep18194_A4863  hypothetical protein  26.44 
 
 		 289 aa  42  0.008  Burkholderia sp. 383  Bacteria  normal  1  normal  0.0834641 
 
 
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