Gene PC1_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2133 
Symbol 
ID8133077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2438560 
End bp2439444 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content53% 
IMG OID644865421 
Producthypothetical protein 
Protein accessionYP_003017708 
Protein GI253688518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAC ATTCAATACC GTTATTAAAG TATCCGCGTA CCCCTCATCT GGAAGGTTCG 
CGCTTACAGC CCGGCGATGA TGCGTCGGAC CAAATCGCAC TGAAAGCGCT GGCAGGCCGT 
TACGTCGTGA TCGAAGAAAA GATCGACGGC GCAAACAGCG GCGTGTCTTT TAATGAAACG 
GCTGAGCTCT TGCTTCAGTC GCGCGGCCAC TATCTGGCTG GCGGCTCGCG GGAACGGCAA 
TTCAACCAGT TCAAGCTCTG GGCCACTGCG CACGAAATGC GGTTTCTTGA ACTACTGGAA 
GACCGATTCG TGATGTACGG CGAATGGGCT TACAGCAAGC ATTCCGTGTT TTATGACCGT 
TTACCGCACT ACTTTCATGA ATTTGATATT TACGATCGTC GTGACGGCAT TTTTTTATCG 
ACGGCCCGCC GACACGCAAT GCTAGCTGGC TCGCCTGTGT TGTCCGTTCC GGTGCTCTAT 
GCCGGAGAGA TGCCAACAAA TCCGGCATTG CTGTGGAAGT TGGTGTTCCG CTCTCTGGCA 
AAAAGCCAGG ACTGGAAGAC CGTCTTTGAA TCCACCGTGC AGCGTGAAAG TTTGCCGCTC 
GCACTGTGCT GGCAACAAAC TGATAAATCG GATCGTTCGG AAGGCCTGTA TCTGAAGGTG 
GAAGATGATG AACAGGTACT AGCACGCTAC AAGCTGGTAC GCCATGACTT CATCCAGACC 
ATTTTGGACA GCGGCTCGCA CCATTCCCGA CGCCCTATTT TGCCGAACCA ACTGGCTGAA 
GGCGTTGATT TGTACGCGCC TTGTCCAACC GTATCCTGGG AAATGCTGGG GCTGAATACG 
CTGCGTTCTT TGGACGCGCT CGCCGCCGCC ATGCCCGATA AATAA
 
Protein sequence
MNLHSIPLLK YPRTPHLEGS RLQPGDDASD QIALKALAGR YVVIEEKIDG ANSGVSFNET 
AELLLQSRGH YLAGGSRERQ FNQFKLWATA HEMRFLELLE DRFVMYGEWA YSKHSVFYDR 
LPHYFHEFDI YDRRDGIFLS TARRHAMLAG SPVLSVPVLY AGEMPTNPAL LWKLVFRSLA 
KSQDWKTVFE STVQRESLPL ALCWQQTDKS DRSEGLYLKV EDDEQVLARY KLVRHDFIQT 
ILDSGSHHSR RPILPNQLAE GVDLYAPCPT VSWEMLGLNT LRSLDALAAA MPDK