Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7067 |
Symbol | |
ID | 8338434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8210133 |
End bp | 8211866 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644960148 |
Product | kinase-like protein |
Protein accession | YP_003117738 |
Protein GI | 256396174 |
COG category | [R] General function prediction only |
COG ID | [COG4639] Predicted kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.106105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.962511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGTCC ACTATCCCCG CACTCCTCAT CTGCCCTGGT CGCCCGGCGC CACCGCAGAC GATGTGCACG CTCGGGACCT GTCAGGGCTC GCAGGACGCC ATGTCGTCGT CACCGAGAAG ATGGACGGGG AGAACACGAC CCTGTACCGG GACGGGTTGC ATGCGCGGTC TTTGGATTCC GGGCATCATC CGTCGCGCGC TTGGGTGAAG GCACTGCACA GCCGGATCGC TGCGCGGATA CCGGAGTGGT GGCGGGTCTC TGGGGAGAAC CTGTTCGCGC GGCATTCGAT CCCTTATGAG GACTTGGACG GGTACTTCTA TGGGTTCTCT ATATGGGATG GCGAGCAGTG CCTCGACTGG ACGTCCACTG TGGAGTTCTT TCGGGGCGTG GGGATTCCGA CGCCTCGTGT GCTGTGGTCC GGGGTCTTTG ACGCGAAGCT GATTCAGCAG CAGGTGAAGC TGGATCTGAG CCGCCAGGAG GGGTACGTAG TACGTCCCTC CGAGGGATTC GCCTATACGG AGTTCGCGGA GCGGGTAGCC AAGTGGGTCC GTCCGTCGCA TGTGCAGACG GATACGCACT GGATGCATGC CGAGGTGGTG CCGAACAAGC TTGGGGCGAG GGCTCCGTTC TGGGCTGTGC GGAGCGGGGT GGATGTCGGC GCTGGGGAAC TGACTGGTGC GCTGTCACTG GAAACCCCTA ATGACGTCGA CGACGACGCC TTAACTGATG CTTATGCGCG TCTCGATGCC GCCGGCTGTC ATGGCAACGC GCGGCTGGTC GGTGCTGCCG CCTCGCTCCT GCATCGTCGG CCGCGCGCCG CGCTGATGGC GGACCTCGCG ACGTCGCTGG AGATGCCGAC GGTGCGGCGG ATCGCCGATG TCGTCGGTCT GGCGCCTCGT CTGCACGCGT CCTTCGATGA CGAGCATCGG CGGGCGGGAC TCGCGCGGAT GGCGTTCGGG ACGGACTTGG GTGTGCTGCA CGCGGTCGCC GCTTCGACTG CGGCCGACAC TGCCGCTGCG GAAAACGTCA CTTGGTCGCT GTTGTTCGCG GAGGACAGCG GTTTGCTTCC GGGCTCGCCG GTCCAGGTGC TGCGCTCGGC GTGTCGTGAA GCGTTCGCGG AACTTCCGCC GCGTGCTGCC GATCGGTGTT GGGGCGAAGC TCGTCAGCTG TTCGCTGAGG GGCGGATCGC CTCGCCCGAG GAAGCGGTGG CAGCGACGTG GCGCTGGCGG GACGGGGCGT TTCCGAAGCT GCACCACATG GTCGGCGTTT CCGCCAGCGG CAAGAGTTCG ACCGCCACGT CCCTCGCGGG TCGCGCGAAC ACCGTCCTCC TCAGCCTCGA TGACCTGCGC ACGGCGCGGG GATCGCGGGC GGACCAGTCG GCGAACCGCG AGGTGCTGGA CGAAGCGCTG CGGCTGCTCG ACGAGGCGCT GGCGCAGGGG GCTGACGTGG TGTGGGACGC AACCTCCCTG ACGCGCCAGC AGCGCGGGTT GGTCGACGGC GTCGCGCGGC GCCGCAACGC GCTGGTCGAG CATCTGGTGC ACTTGGCGCC GGCATCGGTG GTGCGGGAGC GGAACGCGCA GCGTGCGCAT CCTGTCCCCG CGAAAGTGCT GGACGCGCAG CTGCGCCGCT TCGACCCGCC GTATCCGGGC GAGGCGCATC GTGCGGTGTA TGCCGACACG GTTGGCGAGG ACGCGGCGTA TGACGTTCTC GCCTACTCCA TCTGGGAGGG CTGA
|
Protein sequence | MRVHYPRTPH LPWSPGATAD DVHARDLSGL AGRHVVVTEK MDGENTTLYR DGLHARSLDS GHHPSRAWVK ALHSRIAARI PEWWRVSGEN LFARHSIPYE DLDGYFYGFS IWDGEQCLDW TSTVEFFRGV GIPTPRVLWS GVFDAKLIQQ QVKLDLSRQE GYVVRPSEGF AYTEFAERVA KWVRPSHVQT DTHWMHAEVV PNKLGARAPF WAVRSGVDVG AGELTGALSL ETPNDVDDDA LTDAYARLDA AGCHGNARLV GAAASLLHRR PRAALMADLA TSLEMPTVRR IADVVGLAPR LHASFDDEHR RAGLARMAFG TDLGVLHAVA ASTAADTAAA ENVTWSLLFA EDSGLLPGSP VQVLRSACRE AFAELPPRAA DRCWGEARQL FAEGRIASPE EAVAATWRWR DGAFPKLHHM VGVSASGKSS TATSLAGRAN TVLLSLDDLR TARGSRADQS ANREVLDEAL RLLDEALAQG ADVVWDATSL TRQQRGLVDG VARRRNALVE HLVHLAPASV VRERNAQRAH PVPAKVLDAQ LRRFDPPYPG EAHRAVYADT VGEDAAYDVL AYSIWEG
|
| |