Gene Hoch_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1600 
Symbol 
ID8543982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2190343 
End bp2191167 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content69% 
IMG OID646386308 
Producthypothetical protein 
Protein accessionYP_003266043 
Protein GI262194834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.311006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCGG CGATTCGCAA ATACCCGCGC ACGCACCACA TCGAGGGCTC GCGGCTGCAG 
CCGGGCGATG AGGATCTGCA CAGCGTGAAG CTCGCCGAGC TGGCGGGCGA GCACCTGATC
ATCGAGGAGA AGCTCGACGG CGCCAACGCC GCCATCAGCT TCGCGGCCGA CGGCGCGCTG
CGCCTGCAGA GCCGCGGCCA CTTCCTCACC GGCGGCCACC GCGAGCGCCA CTTCCACCTG
TTCAAGAGCT GGGCGAGCAG CCACCAGCAG GCGCTTTGGC GGCTCATCGG CAGCCGCTAC
ATCGTCTACG GCGAGTGGCT GTACGCCAAG CACACGGTGT TCTACGACCG CTTGCCGCAC
TACTTCATGG AGTTCGATAT CTTCGACACC GAGTCCGAAA TCTTTCTGTC CACCGAGCGC
CGCCACGAGC TGCTCGCCGG CAGCCCGGTG GTCTCGGTGC CCGTGCTGTG GACGGGTCAG
GCCCCGGAGC GCGACGGCCG CGACGCGCTC GAGGCGCTGG TCACGCGTTC GCTGTACAAG
TCCGCGCGCT GGCGCGACGC GCTCGCCGAG GGCGCGCGCG CGTGCGAGAT CGACGCCGAG
CGCGCCCGGC GCGAGACCGA CCCCGGCGAC GACGCCGAGG GGCTGTACAT CAAATCCGAG
GCCGATGGAC GCGTGCGCGG GCGCTACAAG TTCGTGCGCG CCAGCTTCCT CACCAGCGTG
CTCGACTCGG GCAGCCACTG GCTCAGCCGC CCCATCCTGC CCAACCAGCT CGCGCCCGGC
GTCGATATAT TCGACCACAC GTCCGCCCAG GACGGTGACG CGTGA
 
Protein sequence
MIAAIRKYPR THHIEGSRLQ PGDEDLHSVK LAELAGEHLI IEEKLDGANA AISFAADGAL 
RLQSRGHFLT GGHRERHFHL FKSWASSHQQ ALWRLIGSRY IVYGEWLYAK HTVFYDRLPH
YFMEFDIFDT ESEIFLSTER RHELLAGSPV VSVPVLWTGQ APERDGRDAL EALVTRSLYK
SARWRDALAE GARACEIDAE RARRETDPGD DAEGLYIKSE ADGRVRGRYK FVRASFLTSV
LDSGSHWLSR PILPNQLAPG VDIFDHTSAQ DGDA