15 homologs were found in PanDaTox collection
for query gene Vapar_0506 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_0506  glycosyl transferase family 2  100 
 
 
259 aa  528  1e-149  Variovorax paradoxus S110  Bacteria  normal  0.220056  n/a   
 
 
-
 
NC_010581  Bind_0088  glycosyl transferase family protein  35.14 
 
 
250 aa  125  1e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3845  glycosyl transferase family 2  28.46 
 
 
385 aa  91.7  1e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5207  glycosyl transferase family 2  28.44 
 
 
254 aa  50.8  0.00002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4950  glycosyl transferase family protein  35.71 
 
 
319 aa  49.7  0.00004  Sinorhizobium medicae WSM419  Bacteria  normal  0.198501  normal  0.142154 
 
 
-
 
NC_010725  Mpop_1556  glycosyl transferase family 2  28.57 
 
 
659 aa  49.3  0.00006  Methylobacterium populi BJ001  Bacteria  normal  normal  0.692069 
 
 
-
 
NC_013131  Caci_8503  glycosyl transferase family 2  28.57 
 
 
280 aa  47.8  0.0002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.396799  normal  0.0440805 
 
 
-
 
NC_011988  Avi_5932  succinoglycan biosynthesis protein  29.36 
 
 
319 aa  44.7  0.001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1539  glycosyl transferase family protein  26.55 
 
 
335 aa  44.3  0.002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0938  glycosyl transferase family protein  29.53 
 
 
317 aa  43.9  0.002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0190  glycosyl transferase family protein  26.55 
 
 
335 aa  44.3  0.002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.801609 
 
 
-
 
NC_012669  Bcav_0341  glycosyl transferase family 2  33.33 
 
 
428 aa  44.7  0.002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1822  glycosyl transferase family protein  28.1 
 
 
265 aa  42.4  0.008  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3220  glycosyl transferase family 2  32.61 
 
 
294 aa  42.4  0.008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2946  glycosyl transferase family protein  27.62 
 
 
335 aa  42  0.009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.765894  normal  0.180956 
 
 
-
 
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