Gene Caci_8503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8503 
Symbol 
ID8339883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9863334 
End bp9864176 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content64% 
IMG OID644961590 
Productglycosyl transferase family 2 
Protein accessionYP_003119167 
Protein GI256397603 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.396799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0440805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTA GCGCGCTGCG CTGGGGAAAA GACACGCTCA ACCGAGTTGT CGGATGGCAG 
GTGATCTTTG AGGTACGCAA CAAAACCTTG AAATGGCCGA GTGTGCTAGG CATGCGCCGT
TTCGAGACCC GAGAAGTGAA ACGGCTACGG AGCGGAGCGC CGGTTTTGTC CGCTCGCGTC
GCCGTGGTGA TCCCGACCTA CCGGCGGCCC GACGGGCTGG CGGCCGCGGT GAAGTCTGTC
CTGGAACAGA CGTGGTCGGA CTTTGTCATC GTGGTCGTGG ACGACGGCGG CGGCGGACTC
GAGGCGGCAG GGCTGCCGGA GGACCCGCGA CTACGGACCG TGTCCCTGTC CCAGAATTCG
CACGTCCTGG GACTGGTACG AAACGTCGGA ATGCGGCTTT CGGAGTCGCG CTTCGTGGCC
TTCTTGGACG ACGACAACGT CTGGGAGCCA GAGCACTTGG CCCTGACAGT GAAAACCCTG
ATGGATTCCC CGCGGCTCTC TGGCGTATAC ACCGCACTGC ACAGAGTGCT GCCGGACGGC
ACAGACCTCG ACGTCTTGTC AGTCCCCTTC GACCGCAAGC GCGCGTCATG GGACTCCTTC
CTCGACTGCA ACGCCTTCGT GGCCGTCCGC AGCCGCGGCC TGATGTTCAG CCGCATGCCC
CGCCCCATCG GCCTGTTGCC GCGCGAGGAC TGGGAAATGA TGTACCGGTT CACGCGCCGC
CACCGCATCA CGCACCTGCC GGTCCCGACC GTCCGCTACC TCGTGAACCC ATCGAGCTTC
TACACACAGT GGGACAAAGA CGGCAAGAGC CAGGACGGCA CCATCAAGGG GGAGACCAAA
TGA
 
Protein sequence
MARSALRWGK DTLNRVVGWQ VIFEVRNKTL KWPSVLGMRR FETREVKRLR SGAPVLSARV 
AVVIPTYRRP DGLAAAVKSV LEQTWSDFVI VVVDDGGGGL EAAGLPEDPR LRTVSLSQNS
HVLGLVRNVG MRLSESRFVA FLDDDNVWEP EHLALTVKTL MDSPRLSGVY TALHRVLPDG
TDLDVLSVPF DRKRASWDSF LDCNAFVAVR SRGLMFSRMP RPIGLLPRED WEMMYRFTRR
HRITHLPVPT VRYLVNPSSF YTQWDKDGKS QDGTIKGETK