Gene Slin_5207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5207 
Symbol 
ID8728973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6357584 
End bp6358348 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content56% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003389978 
Protein GI284040048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCC TCATCAGCGT TATCACCCCA TCGTACAACC AGGGCAAGTT CATTCGGCAA 
ACGGTGGAGT CAGTGCTCTC GCAGAACTAC CCCCGCATCG AGTACATTGT GGTAGATGGG
TTGTCGACGG ATGATACGCT ACCTATTTTG GGCGAGTACA GCAATCGGCT CACGCTGATT
GCCGAACGGG ATAGCGGCCA GACGGACGCT ATCAATAAGG GCTTACGACT GGCTACGGGT
GATATTGTTT GCTGGCTGAA CTCCGATGAT TACTTTCTGC CGGGTGCCCT GGCCACCGTC
GGGGATTTCT TCGCTGATCA CCCGGACAAG CTATGGCTCA CCGGCGACTG CCAGATTGTC
GACGAAGCAA GCGTCCCGAT TCAGCAGCCG GTTCGGCACT ACAAACGGCT GCTCCGTTCG
CTGACACCGT CCCTGTATCT GGGAATGACC AACGCCATCT GCCAGCCCGC TACCTTCTGG
CGACGGGATG CACACGCCCA ACTGGGGTAC CTGACGGAGT CGCTGCATTT TACCATGGAT
TACGACTGGT GGTTACGCCT GCAAACGCTT CAGCCCCCGG CCATCCTGCC GCAACCGTTA
ACGGCCTTTC GCATTCACGC CAACTCTAAA GGCGGCAATC AATACGCGCT TCAGTTCGAT
GAAGATTATC AAACTTTCAG CCGATACTGG TCCGGAGCGC CCATCCGATT CCTGCACAAG
CTCCACAACC GGGCTATTAC AACCGTCTAT AACTTCGTTA AGTGA
 
Protein sequence
MQPLISVITP SYNQGKFIRQ TVESVLSQNY PRIEYIVVDG LSTDDTLPIL GEYSNRLTLI 
AERDSGQTDA INKGLRLATG DIVCWLNSDD YFLPGALATV GDFFADHPDK LWLTGDCQIV
DEASVPIQQP VRHYKRLLRS LTPSLYLGMT NAICQPATFW RRDAHAQLGY LTESLHFTMD
YDWWLRLQTL QPPAILPQPL TAFRIHANSK GGNQYALQFD EDYQTFSRYW SGAPIRFLHK
LHNRAITTVY NFVK