| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0506 |
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| Symbol | |
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| ID | 7972916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 553942 |
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| End bp | 554721 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791109 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_002942435 |
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| Protein GI | 239813525 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.220056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGGCG CGGCGCTCAA GGTGGCCGTG GTCACCCCCT ACCACCGCGA GCCGGCCGCC
GTGCTGCGCC GCTGCATGCA GAGCGTGCAT GCGCAGAGCC ATCCGCAGGT GGTGCACTAC
ATGGTGGCGG ACGGCCTCCC GCAGGCCGGG CTGCTGGCCG AATGGCCGCA GGTGCGGCAC
ATCGTGCTGC CGCAGGTCAA CGCCAACTTC GGCTGCACGC CGCGCGGCAT CGGCGCGTTG
TGCGCGCTGG CCGACGGCGC CGACGTGGTG TGCTTCCTGG ACGCGGACAA CCTGTTCCTG
CCCGGCCACG TCGCCTCGGT GGTGCAGGCC TACGCCGAGG CCCGGGAGCG GGGCCGGCCG
GTCGATGCGG TGTTCTCTTC ACGGTACATG TTCCTGCCGG GCCACGAGCA CCTGCGCATC
GTTCCGCCGG ACGAGGCGCC GGGCTCGGAC TTCGTGGACA CCAACTGCAT CAGCCTGGCC
CGCTCGGCCG GGTTTCTCTG GGGCGCGTGG TCGCAGTTGC CGCGTTCGCT GACGCCCGTG
TGCGACCGGG CGATGTGCTG GCTCATGCAG CACCACGGGC TGCGGGTGCG CTGGACCCGG
CAGTGCACCG TGCTGTACGA ATCGCGCTGG CGCGCCACCT ATCTGCAGGC CGGCCTGCCG
CCGCCCGAGG GGCTGCACGA CGAGCTGCTG CGTTCGGCCG GCGTCGGCCT CACGCCGGAA
GAGCTCTGGG GCCTGCTGCG GGTGCAGTGG AGCTTCGATC CGCCGGCGCG GCGGGCGTGA
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| Protein sequence | MNGAALKVAV VTPYHREPAA VLRRCMQSVH AQSHPQVVHY MVADGLPQAG LLAEWPQVRH
IVLPQVNANF GCTPRGIGAL CALADGADVV CFLDADNLFL PGHVASVVQA YAEARERGRP
VDAVFSSRYM FLPGHEHLRI VPPDEAPGSD FVDTNCISLA RSAGFLWGAW SQLPRSLTPV
CDRAMCWLMQ HHGLRVRWTR QCTVLYESRW RATYLQAGLP PPEGLHDELL RSAGVGLTPE
ELWGLLRVQW SFDPPARRA
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