9 homologs were found in PanDaTox collection
for query gene Tpen_0213 on replicon NC_008698
Organism: Thermofilum pendens Hrk 5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008698  Tpen_0213  DNA-directed RNA polymerase, M/15 kDa subunit  100 
 
 		 93 aa  185  2e-46  Thermofilum pendens Hrk 5  Archaea  normal  1  n/a   
 
 
-
 
NC_009954  Cmaq_0787  DNA-directed RNA polymerase, M/15 kDa subunit  37.93 
 
 		 88 aa  62  0.000000003  Caldivirga maquilingensis IC-167  Archaea  normal  1  normal  0.76775 
 
 
-
 
NC_009073  Pcal_1177  DNA-directed RNA polymerase, subunit M  38.46 
 
 		 89 aa  53.9  0.0000007  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_008701  Pisl_0776  DNA-directed RNA polymerase, M/15 kDa subunit  35.16 
 
 		 89 aa  50.8  0.000006  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0730767  hitchhiker  0.00802939 
 
 
-
 
NC_010525  Tneu_0855  DNA-directed RNA polymerase, M/15 kDa subunit  34.41 
 
 		 91 aa  50.4  0.000008  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.40474  normal  0.643175 
 
 
-
 
NC_009376  Pars_1847  DNA-directed RNA polymerase, M/15 kDa subunit  36.26 
 
 		 89 aa  50.1  0.000009  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  1  normal  0.261561 
 
 
-
 
CP001800  Ssol_1669  DNA-directed RNA polymerase, M/15 kDa subunit  47.27 
 
 		 102 aa  48.9  0.00002  Sulfolobus solfataricus 98/2  Archaea  normal  0.31353  n/a   
 
 
-
 
NC_008698  Tpen_0625  transcription termination factor Tfs  47.73 
 
 		 109 aa  47  0.0001  Thermofilum pendens Hrk 5  Archaea  normal  1  n/a   
 
 
-
 
NC_009440  Msed_1955  DNA-directed RNA polymerase, subunit M  34.88 
 
 		 101 aa  46.6  0.0001  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>