Gene Tpen_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0213 
Symbol 
ID4601806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp192928 
End bp193209 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content55% 
IMG OID639772967 
ProductDNA-directed RNA polymerase, M/15 kDa subunit 
Protein accessionYP_919626 
Protein GI119719131 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT GCCCGAAGTG CGGGGGCCTT ATGCTCCCGA AGAAGATAAA GAGGAGTACG 
TACCTGGTCT GCCAGTCGTG CGGCTACATG GTGAAGGCGA AGAAAGCCGA AACCGCCGGG
TACTCGATGA GGGAGAGTAT CTCCGAGGAT AAGCGTACAA AGGTCTCCGT CTTCGACGTG
AAGAGCGTTA CTCAGGCGGA AGAAGAGAGG GCCCAAGCGA AAGAAGAGTA CTACGAGGTC
TTCCTGGAAA CCTACGCCGA GGAGGAAACC GAGGAAGAGT AG
 
Protein sequence
MEFCPKCGGL MLPKKIKRST YLVCQSCGYM VKAKKAETAG YSMRESISED KRTKVSVFDV 
KSVTQAEEER AQAKEEYYEV FLETYAEEET EEE