Gene Pars_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1847 
Symbol 
ID5056161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1652674 
End bp1652943 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content44% 
IMG OID640469393 
ProductDNA-directed RNA polymerase, M/15 kDa subunit 
Protein accessionYP_001154050 
Protein GI145592048 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.261561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCT GTCCCAAGGA CGGTACCTTA ATGGTGCCAT ACAAAAAAGA CAGCGTGACA 
GTATTAAAAT GTCCAAAGTG CGGCTATGAG GTGAAGCTTA CGGAAAAAGC AAAAGATGCG
TATAGACAAA GGGCAGAAGT ATCAGAAGAA AAAAAGAGGG GCATCATGAT CGCCGAGGAG
AAAAGGATGG AATACGACCA AGAGGAAATG GAAGAGCTGA GAAGACAACT ACTCGAAAAC
CTACAAGAAA GCGAAAGAGA GACAGACTAG
 
Protein sequence
MRFCPKDGTL MVPYKKDSVT VLKCPKCGYE VKLTEKAKDA YRQRAEVSEE KKRGIMIAEE 
KRMEYDQEEM EELRRQLLEN LQESERETD