| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0787 |
|---|
| Symbol | |
|---|
| ID | 5709939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 822636 |
|---|
| End bp | 822902 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641275290 |
|---|
| Product | DNA-directed RNA polymerase, M/15 kDa subunit |
|---|
| Protein accession | YP_001540612 |
|---|
| Protein GI | 159041360 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.76775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTT GCCCTAAGTG CGGAACAGCA ATGGTTCCAG TGAAGAAAGG GAATGCAACA
TACTTAAAGT GCCCTAAATG TGGGTATGAG GAGAAGGTTA ATAAGAAGGA TAGGAAGTCT
TTCGTTGAGA GAAGTGTTGT TGAGGAGGAT AAGCGCGTTA AGGTACCTAT AGTTGAGAAT
AAGAGTAGCT CGGAGGAGGA GGTTGATGAG GATTACCGTA AGCAGCTCCT AGATAACTTA
CTGGAAATGG GGGAGGATTT CGATTAA
|
|---|
| Protein sequence | MKFCPKCGTA MVPVKKGNAT YLKCPKCGYE EKVNKKDRKS FVERSVVEED KRVKVPIVEN
KSSSEEEVDE DYRKQLLDNL LEMGEDFD
|
|---|
| |