Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1955 |
Symbol | |
ID | 5103342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1897144 |
End bp | 1897449 |
Gene Length | 306 bp |
Protein Length | 101 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640507843 |
Product | DNA-directed RNA polymerase, subunit M |
Protein accession | YP_001192019 |
Protein GI | 146304703 |
COG category | [K] Transcription |
COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGTTCT GTCCAAAGGA TGGAGGTATA ATGCTACCTG CGAAGAAGGG TGACAAGGAA ATCCTGAGAT GTAAGAAGTG CGGATATGAG GAACCATTGG ATAAAAAGAC GAGGAAAGCA TATCAGATAA AGGAGGATAA GTCCAAGTCC GGGAAAGTGT TAACTACGTC CATCGTAAGC GAGAAGGAAG GTAGAAGGAG AGAAGACGAT GAATGGGAGC AGGAGAGGGA GGAGTACTAT AAGGAAATTG GCCTGGATTT GTTGAGGGAT GAATTAGAGG GTTCGGAAGA GCACGAAGAG GAATAG
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Protein sequence | MKFCPKDGGI MLPAKKGDKE ILRCKKCGYE EPLDKKTRKA YQIKEDKSKS GKVLTTSIVS EKEGRRREDD EWEQEREEYY KEIGLDLLRD ELEGSEEHEE E
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