Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1177 |
Symbol | |
ID | 4910050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1095506 |
End bp | 1095775 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640124931 |
Product | DNA-directed RNA polymerase, subunit M |
Protein accession | YP_001056068 |
Protein GI | 126459790 |
COG category | [K] Transcription |
COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTTT GTCCCAAGGA CGGCACGTTG ATGGTGCCAG TGAAGAAGGA TGGGACCACT GTGCTTAAGT GCCCCAAGTG CGGCTACGAG GTAAAGCTGA CTGAGAAGGC GAAGGAGGGG TACCGCCAGA GGTCTGAAGT CTCTGAGGAG AAGAAGCGGG GGGTAATGGT TGCCGAGGAG AGAAGACAGG AGTACGACCA GGAGGAGATG GAGGAGATGA GGAGGCTCCT CTTGGAAAAT TTGCAGGAGA GCGAGAGGGA GAGCGACTAG
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Protein sequence | MRFCPKDGTL MVPVKKDGTT VLKCPKCGYE VKLTEKAKEG YRQRSEVSEE KKRGVMVAEE RRQEYDQEEM EEMRRLLLEN LQESERESD
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