71 homologs were found in PanDaTox collection
for query gene Tbd_0153 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007404  Tbd_0153  ABC transport system periplasmic component  100 
 
 		 282 aa  552  1e-156  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.406819 
 
 
-
 
NC_007298  Daro_0059  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  33.07 
 
 		 287 aa  142  7e-33  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.276944 
 
 
-
 
NC_007298  Daro_4085  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  29.13 
 
 		 284 aa  125  8.000000000000001e-28  Dechloromonas aromatica RCB  Bacteria  normal  0.576742  normal  1 
 
 
-
 
NC_011901  Tgr7_1117  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  32.81 
 
 		 283 aa  112  7.000000000000001e-24  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_2154  periplasmic binding protein-related protein  27.11 
 
 		 281 aa  98.2  1e-19  Geobacter bemidjiensis Bem  Bacteria  normal  0.365031  n/a   
 
 
-
 
NC_012918  GM21_2069  periplasmic binding protein-related protein  27.73 
 
 		 281 aa  97.8  2e-19  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000112827 
 
 
-
 
NC_010814  Glov_1574  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  27.21 
 
 		 275 aa  97.4  3e-19  Geobacter lovleyi SZ  Bacteria  normal  0.0431736  n/a   
 
 
-
 
NC_011901  Tgr7_0806  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  29.67 
 
 		 279 aa  95.9  6e-19  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.712577  n/a   
 
 
-
 
NC_008576  Mmc1_1928  phosphonate ABC transporter, periplasmic phosphonate-binding protein  30.37 
 
 		 287 aa  87.4  3e-16  Magnetococcus sp. MC-1  Bacteria  normal  0.368653  normal  0.70306 
 
 
-
 
NC_007298  Daro_0241  periplasmic binding protein-related protein  25.93 
 
 		 276 aa  82.8  0.000000000000006  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_2942  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.8 
 
 		 306 aa  80.1  0.00000000000004  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0608  hypothetical protein  24.05 
 
 		 270 aa  78.6  0.0000000000001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4807  periplasmic binding protein-related protein  25.96 
 
 		 256 aa  76.6  0.0000000000004  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_2014  phosphonate ABC transporter, periplasmic phosphonate-binding protein  26.36 
 
 		 300 aa  76.3  0.0000000000006  Shewanella sp. ANA-3  Bacteria  normal  0.440598  hitchhiker  0.00720049 
 
 
-
 
NC_011138  MADE_03494  ABC-type phosphate/phosphonate transport system, periplasmic component  26.05 
 
 		 274 aa  76.3  0.0000000000006  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1433  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.94 
 
 		 287 aa  73.2  0.000000000004  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1536  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.81 
 
 		 274 aa  72.8  0.000000000006  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_3538  periplasmic binding protein-related protein  27.19 
 
 		 289 aa  72.8  0.000000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.0132329 
 
 
-
 
NC_010506  Swoo_1703  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.42 
 
 		 306 aa  71.6  0.00000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_3121  ABC-type phosphate/phosphonate transport system  24.43 
 
 		 269 aa  63.5  0.000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_0734  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.49 
 
 		 285 aa  63.9  0.000000003  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_1298  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  25.52 
 
 		 305 aa  62.8  0.000000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.965699  n/a   
 
 
-
 
NC_007520  Tcr_1221  phosphonate-binding periplasmic protein  21.92 
 
 		 302 aa  62.8  0.000000006  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_3379  putative phosphonate transport system binding protein htxB precursor phnD  29.19 
 
 		 294 aa  60.1  0.00000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.574529  normal  1 
 
 
-
 
NC_010814  Glov_1986  phosphonate ABC transporter, periplasmic phosphonate-binding protein  26.06 
 
 		 317 aa  59.7  0.00000006  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_4993  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.93 
 
 		 305 aa  59.3  0.00000006  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_0044  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  22.62 
 
 		 290 aa  58.5  0.0000001  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3535  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.1 
 
 		 283 aa  57.8  0.0000002  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008530  LGAS_1847  ABC-type phosphate/phosphonate transport system, periplasmic component  24.2 
 
 		 310 aa  55.8  0.0000007  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000000000117174  hitchhiker  0.000233421 
 
 
-
 
NC_011004  Rpal_0767  phosphonate ABC transporter, periplasmic phosphonate binding protein  27.47 
 
 		 302 aa  54.3  0.000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_3685  periplasmic binding protein-related protein  25.94 
 
 		 285 aa  54.7  0.000002  Dechloromonas aromatica RCB  Bacteria  normal  0.758241  normal  1 
 
 
-
 
NC_009675  Anae109_3021  phosphonate ABC transporter, periplasmic phosphonate-binding protein  26.67 
 
 		 283 aa  54.3  0.000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_4304  phosphonate-binding periplasmic protein  23.22 
 
 		 348 aa  53.1  0.000004  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.0000531117  normal  1 
 
 
-
 
NC_007404  Tbd_2300  phosphonate-binding periplasmic protein  21.14 
 
 		 290 aa  53.1  0.000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.749292  normal  1 
 
 
-
 
NC_011729  PCC7424_1974  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  21.61 
 
 		 295 aa  52.8  0.000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_4202  phosphonate ABC transporter, periplasmic phosphonate binding protein  28.18 
 
 		 309 aa  52.4  0.000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.592498  n/a   
 
 
-
 
NC_013457  VEA_000383  phosphonate ABC transporter phosphate-binding periplasmic component  27.44 
 
 		 228 aa  52  0.00001  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_013889  TK90_1502  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  24.49 
 
 		 299 aa  51.6  0.00002  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  0.896252 
 
 
-
 
NC_008530  LGAS_0129  ABC-type phosphate/phosphonate transport system, periplasmic component  23.81 
 
 		 309 aa  50.4  0.00003  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.0000000000000434068  hitchhiker  0.000000114123 
 
 
-
 
NC_008740  Maqu_1279  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.87 
 
 		 287 aa  50.1  0.00004  Marinobacter aquaeolei VT8  Bacteria  normal  0.144528  n/a   
 
 
-
 
NC_002976  SERP2286  phosphonate ABC transporter, phosphonate-binding protein  20.48 
 
 		 318 aa  49.7  0.00005  Staphylococcus epidermidis RP62A  Bacteria  unclonable  0.00000000000165538  n/a   
 
 
-
 
NC_008739  Maqu_3992  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.87 
 
 		 287 aa  49.7  0.00006  Marinobacter aquaeolei VT8  Bacteria  normal  0.040468  n/a   
 
 
-
 
NC_012560  Avin_47110  phosphonate binding protein  28.28 
 
 		 278 aa  49.7  0.00006  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3241  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.87 
 
 		 287 aa  49.7  0.00006  Marinobacter aquaeolei VT8  Bacteria  normal  0.269297  n/a   
 
 
-
 
NC_007778  RPB_4085  phosphonate-binding periplasmic protein  26.09 
 
 		 302 aa  49.3  0.00008  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.186944  normal  0.0769936 
 
 
-
 
NC_012560  Avin_02550  phosphonate transport system substrate-binding protein  25.4 
 
 		 296 aa  48.5  0.0001  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00474506  n/a   
 
 
-
 
NC_013223  Dret_0095  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.95 
 
 		 534 aa  48.9  0.0001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.360671  normal  1 
 
 
-
 
NC_011901  Tgr7_0913  ABC-type phosphate/phosphonate transport system, periplasmic component  25 
 
 		 287 aa  48.5  0.0001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0260075  n/a   
 
 
-
 
NC_011891  A2cp1_0486  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.99 
 
 		 283 aa  48.1  0.0001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_2109  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  25.2 
 
 		 257 aa  48.1  0.0002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.734617 
 
 
-
 
NC_009667  Oant_2186  phosphonate ABC transporter, periplasmic phosphonate-binding protein  27.44 
 
 		 313 aa  47.4  0.0002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_0134  phosphonate ABC transporter, periplasmic phosphonate-binding protein  21.05 
 
 		 318 aa  46.6  0.0004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_0129  phosphonate ABC transporter, periplasmic phosphonate-binding protein  21.05 
 
 		 318 aa  46.6  0.0004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_2897  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  36.05 
 
 		 288 aa  47  0.0004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3861  phosphonate ABC transporter, periplasmic phosphonate binding protein  27.27 
 
 		 308 aa  46.6  0.0004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.995392 
 
 
-
 
NC_008576  Mmc1_3599  periplasmic binding protein-related protein  20.74 
 
 		 294 aa  46.6  0.0004  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2919  phosphonate ABC transporter, periplasmic phosphonate binding protein  26.15 
 
 		 309 aa  47  0.0004  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010159  YpAngola_A1344  phosphonate ABC transporter periplasmic phosphonate-binding protein  20.74 
 
 		 309 aa  46.2  0.0006  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0522706 
 
 
-
 
NC_012917  PC1_0895  phosphonate ABC transporter, periplasmic phosphonate binding protein  21.14 
 
 		 310 aa  46.2  0.0006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0491  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.59 
 
 		 283 aa  46.2  0.0006  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_2877  phosphonate ABC transporter, periplasmic phosphonate binding protein  20.74 
 
 		 309 aa  45.8  0.0007  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_2798  phosphonate ABC transporter, periplasmic phosphonate-binding protein  20.74 
 
 		 309 aa  45.8  0.0007  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0650  phosphonate ABC transporter, periplasmic phosphonate-binding protein  21.9 
 
 		 331 aa  45.4  0.001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_3404  phosphonate ABC transporter, periplasmic phosphonate-binding protein  22.57 
 
 		 284 aa  44.3  0.002  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_1411  phosphonate ABC transporter, periplasmic phosphonate-binding protein  20.83 
 
 		 310 aa  44.3  0.002  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_2746  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.53 
 
 		 308 aa  43.9  0.003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007519  Dde_0601  phosphonate-binding periplasmic protein  22.83 
 
 		 339 aa  43.9  0.003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_0513  phosphonate ABC transporter, periplasmic phosphonate-binding protein  26.73 
 
 		 352 aa  42.7  0.007  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1321  phosphonate ABC transporter, periplasmic phosphonate-binding protein  28.14 
 
 		 302 aa  42.7  0.007  Xanthobacter autotrophicus Py2  Bacteria  normal  0.40194  normal  1 
 
 
-
 
NC_008740  Maqu_3254  phosphonate ABC transporter, periplasmic phosphonate-binding protein  27.91 
 
 		 293 aa  42.4  0.008  Marinobacter aquaeolei VT8  Bacteria  normal  0.253962  n/a   
 
 
-
 
NC_007760  Adeh_0457  ABC phosphonate-binding periplasmic protein  24.88 
 
 		 283 aa  42.4  0.01  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.356544  n/a   
 
 
-
 
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