| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2942 |
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| Symbol | |
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| ID | 5610790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3561925 |
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| End bp | 3562845 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933882 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_001474677 |
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| Protein GI | 157376077 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT CACAGTTCAG TGTCCAGGTT TTGTTTCTAT CATGTTTGTT GAGTGTCACT
GGAAGTGCTT ATGGTGAAAA TGACAAACAT TCACACAATA GCAATGAGTT AGGTGCTCCT
CGCACGATAA CATTTGGTGT TGTTCCCCAG CAGGCTGCTA GCACACTCGC GCGCTTATGG
TCTCCGGTGT TGGCTGAATT GTCGCAAAAT GCAAATTTCA ATTTGCGATT TGCAACGGCG
CCGGACATTC CAACTTTTGA AAAGCGGCTC GCTTCGGGTG AATACGATGT CGCCTATATG
AACCCCTACC ACTACACGGT ATTTCATGAA GCTCCCGGTT ATCAAGCCTT GGTCAAGCAG
AAAGGTAAGC AGATCAAAGG CATTATTGTG GTTCGCAAAG ACTCACCTAT CCTCACTATC
GATGATTTGA ATAATAAAGA TGTAGTCTTT CCCGCGCCCG CGGCCTTTGC CGCCAGTGTT
CTCCCCAGAG CAAACTTAAA GGTAAGAGGG CTTGAGAATC GGGTTAAATA TGTCGGTTCT
CATGATTCTG TTTACCTCGC GGTGGCGCAG GGCTTGGTAG ATGCCGGAGG GGGAGTAAAA
AGAACCTTCA AGACGATGGA TAAGGCGACG ACAAGCCAAC TTAGAGTTTT ATGGGAGACC
CCGGGTTATA CCCCTCATGC CATTGCCGTT CATCCAAGAG TTCCGGCAGG TATTGTTGAG
GAACTTAGAC AAGGTTTTGT CGAGTTATCA TCATCTTCCC AAGGTGCTGA AGTGCTAAAT
GTATTGGGCC TTAAAAGTTT TGAGGCTGCT AAAAATAGCG ATTGGGATGA TGTACGCTCG
CTGGGTTTAG GTACGTTTGA AAAACCTTTA GAAAACTCCA GTGACATAGC TGATAAGCCG
TCAGTGAAAG GAGAGCTGTA G
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| Protein sequence | MKISQFSVQV LFLSCLLSVT GSAYGENDKH SHNSNELGAP RTITFGVVPQ QAASTLARLW
SPVLAELSQN ANFNLRFATA PDIPTFEKRL ASGEYDVAYM NPYHYTVFHE APGYQALVKQ
KGKQIKGIIV VRKDSPILTI DDLNNKDVVF PAPAAFAASV LPRANLKVRG LENRVKYVGS
HDSVYLAVAQ GLVDAGGGVK RTFKTMDKAT TSQLRVLWET PGYTPHAIAV HPRVPAGIVE
ELRQGFVELS SSSQGAEVLN VLGLKSFEAA KNSDWDDVRS LGLGTFEKPL ENSSDIADKP
SVKGEL
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