Gene Dde_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0601 
Symbol 
ID3755935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp623459 
End bp624478 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content59% 
IMG OID637781462 
Productphosphonate-binding periplasmic protein 
Protein accessionYP_387097 
Protein GI78355648 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGAACT CAGACAGAAG AAAGGCCGCG CGGGCCGGCG GAGGCGCTCT GTCCGCAGAA 
GCAGGGGAAA GCGCTCTGCG CCGTATTTTT TTCAGGCAGC CGGAACTTTT TGCGTTCCTG 
CTGCTTTTCT GCGTTCTGGC GGGGGGCTGC GGCGAAAATG AAGAAGTGGT GCGGGTGGAC 
CTGTCGCACC GCGAACGTAT TGTGGTGGCC AAACCGGCAG AGGCGGTCAC CTACGCCTAC 
CTGCCCCAGT ATTCGCACAC CACGTCCTAC ACGCGGCATA ACCCGCTGGT GGAATATCTT 
GAGCGGGAAT CGGGCCTTAC CATGCGTCAG GTGTTTCCCG ACACGTTTGA AGAACACACC 
CGCATGGTTG AGCGCGGCGA GATAGATATC TCTTTTTCCA ATCCGTTCAC ATATGTCCGG 
CTGGCGCAGA AAGGGGCCAC CGCTTTTGCC AGAGTCATCG AACCGTCGGG CAGACCTTTT 
TTCCGCGGGC AGATAATCGC ACGCATCGAC AGCGGCATAC GGCGGCTTGA AGACTGCGAG 
GGCAAACGCT GGATAGCGGT GGATCCGCTT TCCGCGGGCG GGTATCTGTT TGCGCTGGGT 
ATGTTCCACG ACATGGGGCT GGATACGGAT GATTTTGCGG CCGTGGATTT TGCTCCGGGC 
CCCGGAGGCA AGCAGGAAAA AGCTGTCCTT GCGGTGTACG CGGGCAAGTA CGACTTTGCT 
TCCATACGGG AAGGCACGCT GGATATCGTG CGTGACAAAA TAGATCCGGA ACGCATACGG 
GTTGTCGCAA CCACACAGGC GTATCCCGGC TGGGTGTATG CCGCGCGCAA GGGGCTGGAC 
CCCGCGGTGG TCGACCGCAT ACGCAATGCC ATGTTCAGGC TGTCCATGGA AGAACCCGAA 
GGCGGGCGCA TACTGGCCAA TGCGGGCATA CGCGGTATAA TTCCCGCTGC CGATGCCGAT 
TACGCCCCCA TAAGGGAGCT GATGTCCAAA CTTGATCTGT ACGGGGAGGT GGACTGGTGA
 
Protein sequence
MENSDRRKAA RAGGGALSAE AGESALRRIF FRQPELFAFL LLFCVLAGGC GENEEVVRVD 
LSHRERIVVA KPAEAVTYAY LPQYSHTTSY TRHNPLVEYL ERESGLTMRQ VFPDTFEEHT 
RMVERGEIDI SFSNPFTYVR LAQKGATAFA RVIEPSGRPF FRGQIIARID SGIRRLEDCE 
GKRWIAVDPL SAGGYLFALG MFHDMGLDTD DFAAVDFAPG PGGKQEKAVL AVYAGKYDFA 
SIREGTLDIV RDKIDPERIR VVATTQAYPG WVYAARKGLD PAVVDRIRNA MFRLSMEEPE 
GGRILANAGI RGIIPAADAD YAPIRELMSK LDLYGEVDW