Gene Daro_4085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4085 
Symbol 
ID3566849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4378840 
End bp4379694 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content62% 
IMG OID637682557 
ProductABC-type phosphate/phosphonate transport system periplasmic component-like protein 
Protein accessionYP_287281 
Protein GI71909694 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.576742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACC GGAATCCCAC CACCTTGCGC CGCTTTTTCC TGAAATTTTT CTTTGGCATG 
GCCTGCGCCA CCATCCTTGG CCCGGCATGG GCAGAGGAAC CCCGCCCCTT CGTACTTGGC
ATTGCCCCCC ACACCAGCGC CCGGGTGATT CTGGAAATGT ACCAGCCGCT GCGCCAGTCT
CTGGAAGCAG CCCTGAAGCA ACCCGTGGAA GTTCAGACTG CCCCTGATTT CAGCGAATTT
GCCCGCCGCG CCCTGAATCA GGAATACGAC ATCGCCGTCA CGACCGGGCA CCAGGCCCGC
CTCTACCAGA CCGATGCCGC CTACCTGCCG CTGCTGACCT ATGTCGCCGA ATTCAAGGCA
GTAGCCCTGG TGGACAAGAA TGGGCCGATC CACACAGCGG CCGACCTGAA AGGGAAATCC
GTCCTCGGAC TGTCGCCCAC TTCGCTGGTC ACCCTGTGGG GCCAGCAATG GCTGAAAAAG
CAGAATCTCG GCGACGTTCC CGTCCGCTAC GTTTCGGCCG CCGACAGCGT CAGCCGGCAA
GTGCTGGCCG GCGAGGCCGC CGCCGCCTTT ACGTCGCTGG CCAATTACCA GAAGCTGCCG
CCGGACATCC GCCCCCGCAT GCGCATCCTG GCCGAAAGCG AACCGATGGC CGGGCGGGTC
TATATGCTCA ACAAGCGCTG GAGCAAGGAG CGCAAAGGTA TAGAAAAGGC CCTCTGGGCA
TTTGCCGCCA CGCCTGAAGG CAAGGCCTAC TTCGAGCAGA ACAAGCTCGA TGGCTATCGC
AACCTGAAGC CGCGCGAACT TGAGGCGATG GACCCGTATG TCGCTGAAAC GCGGCAGGCG
CTGAGCTCAA AATGA
 
Protein sequence
MPDRNPTTLR RFFLKFFFGM ACATILGPAW AEEPRPFVLG IAPHTSARVI LEMYQPLRQS 
LEAALKQPVE VQTAPDFSEF ARRALNQEYD IAVTTGHQAR LYQTDAAYLP LLTYVAEFKA
VALVDKNGPI HTAADLKGKS VLGLSPTSLV TLWGQQWLKK QNLGDVPVRY VSAADSVSRQ
VLAGEAAAAF TSLANYQKLP PDIRPRMRIL AESEPMAGRV YMLNKRWSKE RKGIEKALWA
FAATPEGKAY FEQNKLDGYR NLKPRELEAM DPYVAETRQA LSSK