27 homologs were found in PanDaTox collection
for query gene Lcho_2109 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_2109  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  100 
 
 		 257 aa  527  1e-149  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.734617 
 
 
-
 
NC_011761  AFE_2384  hypothetical protein  37.55 
 
 		 290 aa  177  1e-43  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_2014  ABC-type phosphate/phosphonate transport system periplasmic component  37.55 
 
 		 290 aa  177  1e-43  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.744001  normal  1 
 
 
-
 
NC_007484  Noc_1486  ABC-type phosphate/phosphonate transport system periplasmic component  27.27 
 
 		 248 aa  125  7e-28  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000364049  n/a   
 
 
-
 
NC_010524  Lcho_0660  ABC-type phosphate/phosphonate transport system periplasmic component  28.22 
 
 		 248 aa  107  2e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008781  Pnap_2811  ABC-type phosphate/phosphonate transport system periplasmic component  30.7 
 
 		 249 aa  95.9  6e-19  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.397411  decreased coverage  0.00000037671 
 
 
-
 
NC_007948  Bpro_4807  periplasmic binding protein-related protein  25.11 
 
 		 256 aa  62.4  0.000000006  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0608  hypothetical protein  23.93 
 
 		 270 aa  60.5  0.00000002  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2069  periplasmic binding protein-related protein  26.44 
 
 		 281 aa  59.7  0.00000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000112827 
 
 
-
 
NC_007298  Daro_3685  periplasmic binding protein-related protein  25.64 
 
 		 285 aa  59.3  0.00000006  Dechloromonas aromatica RCB  Bacteria  normal  0.758241  normal  1 
 
 
-
 
NC_011146  Gbem_2154  periplasmic binding protein-related protein  26.42 
 
 		 281 aa  58.9  0.00000007  Geobacter bemidjiensis Bem  Bacteria  normal  0.365031  n/a   
 
 
-
 
NC_008576  Mmc1_3599  periplasmic binding protein-related protein  25.11 
 
 		 294 aa  57.8  0.0000002  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_2014  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.3 
 
 		 300 aa  56.6  0.0000004  Shewanella sp. ANA-3  Bacteria  normal  0.440598  hitchhiker  0.00720049 
 
 
-
 
NC_010730  SYO3AOP1_0192  hypothetical protein  21.99 
 
 		 207 aa  54.7  0.000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1433  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.91 
 
 		 287 aa  53.1  0.000004  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_3538  periplasmic binding protein-related protein  26.58 
 
 		 289 aa  51.2  0.00002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.0132329 
 
 
-
 
NC_007298  Daro_0241  periplasmic binding protein-related protein  25.1 
 
 		 276 aa  49.3  0.00007  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_0491  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.46 
 
 		 283 aa  48.5  0.0001  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_1974  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  27.01 
 
 		 295 aa  48.1  0.0001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_010730  SYO3AOP1_0011  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  21.99 
 
 		 952 aa  48.1  0.0002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_2942  phosphonate ABC transporter, periplasmic phosphonate-binding protein  21.88 
 
 		 306 aa  48.1  0.0002  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_0457  ABC phosphonate-binding periplasmic protein  25.33 
 
 		 283 aa  47.4  0.0002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.356544  n/a   
 
 
-
 
NC_007404  Tbd_0153  ABC transport system periplasmic component  25.6 
 
 		 282 aa  47  0.0003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.406819 
 
 
-
 
NC_011891  A2cp1_0486  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.15 
 
 		 283 aa  46.6  0.0004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_3021  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.68 
 
 		 283 aa  46.2  0.0006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_1536  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.21 
 
 		 274 aa  44.7  0.001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3535  phosphonate ABC transporter, periplasmic phosphonate-binding protein  29.01 
 
 		 283 aa  42.7  0.005  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
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