Gene YpsIP31758_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2798 
SymbolphnD 
ID5384946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp3163455 
End bp3164384 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content41% 
IMG OID640865791 
Productphosphonate ABC transporter, periplasmic phosphonate-binding protein 
Protein accessionYP_001401762 
Protein GI153949546 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TATTATGCCT TACCTCATTG TTGGCTGGAA TGATGATATT TAATGCCACG 
GCAGAGGATG CGCCAAAAGA AATTAATCTG GGCATTCTTG GTGGGCAAAA CGCGACACAG 
CAGATTGGCG ATAATATGTG TGTCAAAGAA TTTTTAGATA AAGAATTAAA TGTAAAAACT 
AATTTACATA ATGCCTCTGA CTATTCTGGT GTTATTCAAG GTATTTTGGG CGGGAAAATT 
GACTTAGTAT TGAGTATGTC ACCTTCTTCT TTCGCATCAA TTTATATCAA AGATCCTAAC 
GCTGTTGAAT TGGTCGGAAT TGCCATTGAT GATACGGATA AATCTAGGGG TTATCACTCC 
GTTGTGGTAG TTAAAGCGGA CAGTCCTTAC CAAAAACTTG AAGATTTGAA AGGCAAAGCA 
TTTGGTTTTG CTGATCCAGA TTCAACATCT GGCTTCTTGA TCCCTAACCA AAGTTTCAAA 
CAGCAGTTTG GTGGATCAGT GGACAATAAA TACAATAACT TCTTCTCCAG CGTCACGTTC 
TCTGGGGGCC ATGAACAGGA CATTTTAGGT GTTATTAATG GTCAGTTTGC TGGTGCGGTA 
ACGTGGGCAT CAATGATCGG TGATTATGAT ACTGGGTATA CCAGCGGTGC ATTCACGCGC 
ATGATCCGCA TGGGCCAACC GGACCTCATG AAGAAGATTC GAATTATCTG GCAATCTCCG 
TTGATCCCCA ATGGCCCGAT TTTAGTCCGT AGTGCTTTAC CGCCAGAGTT TAAAGCGCAG 
TTAGTGGCTG CGATTAAAAA GTTAGATAAA GAAGATCACG GCTGCTTCAT TAAAGCGATG 
GGCGGTAAAC AGCATATTGG TGAGACGTCA CTTAGCGAGT ATCAAAATAT TATTGATATG 
AAGCGTGAAT TAACCAAAGG CGACCGTTAA
 
Protein sequence
MKKILCLTSL LAGMMIFNAT AEDAPKEINL GILGGQNATQ QIGDNMCVKE FLDKELNVKT 
NLHNASDYSG VIQGILGGKI DLVLSMSPSS FASIYIKDPN AVELVGIAID DTDKSRGYHS 
VVVVKADSPY QKLEDLKGKA FGFADPDSTS GFLIPNQSFK QQFGGSVDNK YNNFFSSVTF 
SGGHEQDILG VINGQFAGAV TWASMIGDYD TGYTSGAFTR MIRMGQPDLM KKIRIIWQSP 
LIPNGPILVR SALPPEFKAQ LVAAIKKLDK EDHGCFIKAM GGKQHIGETS LSEYQNIIDM 
KRELTKGDR